Pairwise Alignments

Query, 751 a.a., lysine decarboxylase from Pseudomonas simiae WCS417

Subject, 720 a.a., ornithine decarboxylase SpeF from Vibrio cholerae E7946 ATCC 55056

 Score =  358 bits (918), Expect = e-103
 Identities = 225/651 (34%), Positives = 321/651 (49%), Gaps = 44/651 (6%)

Query: 118 LRGILYLFEDTVPFLARQVARAARTYLDGLLPPFFKALVQHTADSNYSWHTPGHGGGVAY 177
           + G+  L +  V F  +QV  A R Y + LLPPFF  L ++    N ++  PGH GG  +
Sbjct: 78  ITGVFELCDAKVEFYGKQVETAVRRYQESLLPPFFGTLKKYVDMGNSTFACPGHQGGQFF 137

Query: 178 RKSPVGQAFHQFFGENTLRSDLSVSVPELGSLLDHTGPLAEAEARAARNFGADHTFFVIN 237
           RK PVG+ F  FFGE   RSD+  +   LG LL H G   +A+A AA+ + AD T+FV+N
Sbjct: 138 RKHPVGRQFFDFFGETLFRSDMCNADVRLGDLLIHEGAPHDAQAYAAKVYNADKTYFVLN 197

Query: 238 GTSTANKIVWHSMVGRDDLVLVDRNCHKSVLH-SIIMTGAIPLYLCPERNELGIIGPIPL 296
           GTS +NK+V ++++   DLVL DRN HKS  H ++I  GA P+YL   RN  G IG I  
Sbjct: 198 GTSASNKVVCNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPFGFIGGIDT 257

Query: 297 SEFSPESIR---AKIDASPLTRGRPPKVKLAVVTNSTYDGLCYNAELIKQQLGNSVEVLH 353
             F+   +R     +D S     RP   +LA++   TYDG  YNA  +  ++G+  + + 
Sbjct: 258 HCFNESYLRDAVRNVDPSRAEAKRP--FRLAIIQLGTYDGTIYNARQVVDRIGHLCDYIL 315

Query: 354 FDEAWYAYAAFHEFFAGRYGMGTSRTPDSPLVFTTHSTHKLLAAFSQASMIHVQD----G 409
           FD AW  Y  F         +     P+ P +  T S HK  A FSQ S IH +D    G
Sbjct: 316 FDSAWVGYEQFIPMMKDCSPLLLDLKPEDPGIIVTQSVHKQQAGFSQTSQIHKKDHHIKG 375

Query: 410 GARQLDRDRFNEAFMMHISTSPQYSIIASLDVASAMMEGPAGRSLLQEMFDEALSFRRAL 469
             R  +  RFN AFM+H STSP Y + A+LDV + M EG +GR L +E     +  R+ L
Sbjct: 376 QERYCNHKRFNNAFMLHASTSPFYPLFAALDVNAKMHEGDSGRYLWREAVKTGIEARKLL 435

Query: 470 ANLRQHIAEEDWWFSIWQPPSVAGIDRVVTADWLLHPQDD---------------WHGFG 514
               ++I         + PP + G        W  HP +                WH F 
Sbjct: 436 MKKCKYIKP-------FIPPMIEG------KPWQSHPTEQIADDLRFFEFEPGQKWHAFE 482

Query: 515 DVAEDYVLLDPIKVTLVMPGL-TAGGALSDCGIPAAVVSKFLWERGLVVEKTGLYSFLVL 573
                   +DP K  L  PG+    G     GIPA +++ FL E  ++ EK  L S L L
Sbjct: 483 GYEHGQYFVDPCKFLLTTPGIDPETGEYEHFGIPATILANFLRENNIIPEKCDLNSILFL 542

Query: 574 FSMGITKGKWSTLLTELLEFKRSYDANVSLASCLPSVFAQGPTRYQGLGLRDLCDQLHSC 633
            +      K   L+ ++  F+R  + +  L+  LP+V+     RY+G  +R LC ++H  
Sbjct: 543 LTPAEDMAKMQHLVAQIARFERLIEEDAPLSEVLPNVYRANRERYKGYTIRQLCQEMHDL 602

Query: 634 YRSNATAKHLKRMYTV--LPEIAMKPADAYDQLVRGEVEAVSIDALPGRIAAVMLVPYPP 691
           Y S+   +  K M+     P   M P +A    VRG+VE V +  + GRIAA   +PYPP
Sbjct: 603 YVSHDVKQLQKEMFRARYFPRAVMNPQEANLAFVRGQVELVPLREVEGRIAAEGALPYPP 662

Query: 692 GIPLIMPGERFTESTRSIIDYLAFARTFDSSFPGFVADVHGLQHEDDGSGR 742
           G+  ++PGE +  S +    Y        +  PGF  ++ G+  E  G GR
Sbjct: 663 GVLCVVPGEIWGGSVQR---YFLALEEGINLLPGFAPELQGVYLEPTGEGR 710