Pairwise Alignments

Query, 751 a.a., lysine decarboxylase from Pseudomonas simiae WCS417

Subject, 711 a.a., lysine decarboxylase from Vibrio cholerae E7946 ATCC 55056

 Score =  560 bits (1442), Expect = e-163
 Identities = 290/659 (44%), Positives = 415/659 (62%), Gaps = 26/659 (3%)

Query: 93  LPIFALG-EQVTLENAPADAMSELNQLRGILYLFEDTVPFLARQVARAARTYLDGLLPPF 151
           LP+ A   EQ TL+ +  D    ++     L + +D    +A ++ +A + Y D ++PPF
Sbjct: 77  LPVHAFANEQSTLDISLTDLRLNVHFFEYALGMADD----IAIKINQATQEYKDAIMPPF 132

Query: 152 FKALVQHTADSNYSWHTPGHGGGVAYRKSPVGQAFHQFFGENTLRSDLSVSVPELGSLLD 211
            KAL ++  +  Y++ TPGH GG A++KSPVG  F+ F+G NT ++D+S+S+PELGSLLD
Sbjct: 133 TKALFKYVEEGKYTFCTPGHMGGTAFQKSPVGSIFYDFYGPNTFKADVSISMPELGSLLD 192

Query: 212 HTGPLAEAEARAARNFGADHTFFVINGTSTANKIVWHSMVGRDDLVLVDRNCHKSVLHSI 271
           H+GP  EAE   AR F AD ++ V NGTST+NKIV          VLVDRNCHKS+ H +
Sbjct: 193 HSGPHKEAEEYIARTFNADASYIVTNGTSTSNKIVGMFSAPAGSTVLVDRNCHKSLTHLM 252

Query: 272 IMTGAIPLYLCPERNELGIIGPIPLSEFSPESIRAKIDASPLTRGRPPKVKLAVVTNSTY 331
           +MT   P+Y  P RN  GI+G IP +EFS E I  K+  +P           AV+TNSTY
Sbjct: 253 MMTDVTPIYFRPTRNAYGILGGIPQNEFSREVIAEKVANTPGASAP----SYAVITNSTY 308

Query: 332 DGLCYNAELIKQQLGNSVEVLHFDEAWYAYAAFHEFFAGRYGMGTSRTPDSPLVFTTHST 391
           DGL YN + IK+ L    + +HFD AW  Y  F+  + G+ GM     P   + + T ST
Sbjct: 309 DGLLYNTQFIKESL--DCKHIHFDSAWVPYTNFNRIYEGKCGMSGEAMPGK-VFYETQST 365

Query: 392 HKLLAAFSQASMIHVQDGGARQLDRDRFNEAFMMHISTSPQYSIIASLDVASAMMEGPAG 451
           HKLLAAFSQASMIHV+     + DR+ FNEAFMMH STSPQY I+AS + A+AMM G  G
Sbjct: 366 HKLLAAFSQASMIHVKG----EFDRESFNEAFMMHTSTSPQYGIVASTETAAAMMRGNTG 421

Query: 452 RSLLQEMFDEALSFRRALANLRQHIAEEDWWFSIWQPPSVAGIDRVVTADWLLHPQDDWH 511
           R L+Q+  D A+ FR+ +  L+     E W+F +WQP ++       T  W L P  DWH
Sbjct: 422 RKLMQDSIDRAIRFRKEIKRLKGE--SEGWFFDVWQPENIE-----TTECWKLDPNQDWH 474

Query: 512 GFGDVAEDYVLLDPIKVTLVMPGLTAGGALSDCGIPAAVVSKFLWERGLVVEKTGLYSFL 571
           GF ++ ++++ LDPIK+TL+ PG++  G L   GIPA++VSK+L E G+VVEKTG Y+ L
Sbjct: 475 GFKNLDDNHMYLDPIKITLLTPGMSKDGELEQSGIPASLVSKYLDEHGIVVEKTGPYNLL 534

Query: 572 VLFSMGITKGKWSTLLTELLEFKRSYDANVSLASCLPSVFAQGPTRYQGLGLRDLCDQLH 631
            LFS+GI K K   LL  L EFKR YD N+++ + LPS++ + P  Y+G+ +++L   +H
Sbjct: 535 FLFSIGIDKSKAMQLLRGLTEFKRGYDLNLTIRTMLPSLYREDPVFYEGMRIQELAQGIH 594

Query: 632 SCYRSNATAKHLKRMYTVLPEIAMKPADAYDQLVRGEVEAVSIDALPGRIAAVMLVPYPP 691
              R     + + + + VLPE+ + P  A+ Q +RG+ E + ++ + GR++A M++PYPP
Sbjct: 595 DLTRKYQLPELMYKAFDVLPEMKVTPHVAWQQELRGQTEEILLNEMVGRVSANMILPYPP 654

Query: 692 GIPLIMPGERFTESTRSIIDYLAFARTFDSSFPGFVADVHGLQHEDDGSGRCYTVDCIK 750
           G+PL++PGE  T+S+R ++D+L       + +PGF  D+HGL  + DGS   YTV  +K
Sbjct: 655 GVPLVLPGEMVTDSSRPVLDFLEMLCEIGAHYPGFETDIHGLYRQKDGS---YTVKVLK 710