Pairwise Alignments

Query, 150 a.a., ribonuclease H from Pseudomonas simiae WCS417

Subject, 259 a.a., RNase HI from Synechococcus elongatus PCC 7942

 Score =  148 bits (373), Expect = 7e-41
 Identities = 74/142 (52%), Positives = 96/142 (67%), Gaps = 6/142 (4%)

Query: 1   MTDSV-ELFTDGACKGNPGPGGWGALL-VCKGVEKELWGGEPNTTNNRMELMGAIRGLEE 58
           M+D++  L+TDGAC GNPGPGGWG  +    G  +EL G +  TTNNRMEL  AI  LE 
Sbjct: 1   MSDAILRLYTDGACTGNPGPGGWGVQIQFADGTVQELGGRDAATTNNRMELQAAIAALEF 60

Query: 59  LKRRCN---VLLVTDSQYVMKGINEWMVNWKKRGWKTAAKEPVKNADLWQLLDEQCNRHD 115
            +   +   V L TDS+YV+KGI +W+  W+++GWKTAA +PV N DLW  LD+  N   
Sbjct: 61  WRDHSDQQPVTLYTDSEYVIKGITQWLKGWQRKGWKTAAGKPVLNQDLWMHLDD-LNSPA 119

Query: 116 ITWKWVRGHIGHPGNERADQLA 137
           + W++VRGH G PGNER DQ+A
Sbjct: 120 VQWQYVRGHSGDPGNERCDQIA 141