Pairwise Alignments

Query, 609 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 565 a.a., oligopeptide-binding protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 97.4 bits (241), Expect = 1e-24
 Identities = 121/505 (23%), Positives = 202/505 (40%), Gaps = 68/505 (13%)

Query: 116 AQSVEYSEDRSWVVFNLRPEARFHDGKPITAYDVAFSYRTLLTEGHPQ-YRTNLQEVARV 174
           A+S E  +    + F LR   R+ DG  +TA DV F+Y+ ++    P  Y  +   V   
Sbjct: 110 AESYEVLDGGRLLRFKLRKGIRWQDGVELTADDVEFTYKLIIAPTTPTPYAGDFLAVQEF 169

Query: 175 DILNRHRIRFVFKRAGNPLLILRLGELPVLPQHYWKNRDFKATTF-EPPLGSGPYRISKV 233
               R+     + +     LI  + +  ++P+H  + +D + T F   P+G+GPY +   
Sbjct: 170 RKTGRYSFEVRYDKPFARSLISWMQD--IMPKHLLEGQDVRTTPFARKPVGAGPYMLESW 227

Query: 234 TPGRQLVFERVKNYWGKDLPVNRGFYNYDKVEVEFYRDSDVAFEAFKAGEFDIY--IEHQ 291
            PG +LV     +Y+        G  + D+V      D+   F   KAG+ D+      Q
Sbjct: 228 EPGTRLVLRANPDYF-------EGRPHIDEVVYRIIPDNATMFLELKAGKLDMMGLSPQQ 280

Query: 292 AKNWANGYNFPAVNRGDVIKAQIAHQIPTQSQGLFMNSRRPIFSQAKVREALGLMFDFEW 351
                +GY +    R           +      L  N + P F+ A+VR A+    D E 
Sbjct: 281 YLRQTDGYTWERDWRK-------YRYLSFGYTYLGYNLKHPFFADARVRRAIAHAIDREG 333

Query: 352 TNR-TLFSSAYKRTLSYYPNSEFSATGVPTGHEWLMLSPYRDQLPASLFTQPFSLPQTDG 410
             +  L          Y P +            W+    Y D+L A  +           
Sbjct: 334 IIKGVLLGQGVPTVGPYKPGT------------WV----YNDRLTAYSYDPAL------- 370

Query: 411 RGIPRETMRRALALLGDAGWK-LSGQRLLNKDGQPLRFEILLVNPNLERILQPYV--ENL 467
                     A  +L +AGW+   G  +L+++G+P  F IL    N +RI    +    L
Sbjct: 371 ----------AAEMLREAGWQDTDGDGILDREGRPFAFTILTNQGNDQRIKTATIIQSQL 420

Query: 468 ISIGIDARLRTVDRAQY-KQRLDQFDFDMILITLNQTLSPGLEQWQYFHSSQAAIKGSKN 526
             +GI  ++RTV+ A + K+ ++   FD +++  N T  P  + +  +HSS+A   G  N
Sbjct: 421 KDVGIRVQIRTVEWAAFIKEFVNTGRFDAVILGWNITQDP--DAYDVWHSSKAE-PGGLN 477

Query: 527 YAGIANPIVDHLLEQLLAAKTREEQLAAGRALDRVLLWQHYSIPN--WYLNYHRLAYRNR 584
           + G  N  VD +LE+   A+   +Q    +  DR     H   P    Y+ Y       R
Sbjct: 478 FVGYRNAEVDAVLEK---ARRTFDQDERKQYYDRFQEIVHRDQPYCFLYVPYALPVVAAR 534

Query: 585 FAFVTTPPYSL--GLSAWWLKASEK 607
           F  +   P  L    + WW+   ++
Sbjct: 535 FRGIDPAPAGLMHNFNRWWVPVDQQ 559