Pairwise Alignments

Query, 339 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 352 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  485 bits (1249), Expect = e-142
 Identities = 227/334 (67%), Positives = 281/334 (84%), Gaps = 1/334 (0%)

Query: 4   SPLNRRRFERFKANKRGWWSLWLFLSLFVLSLGAELIANDKPLAVHYDGGWYFPALKRYP 63
           +PL   R+ RFKAN+RG+WSLW+FL LFV+SL AELIANDKPL + YDG WY P ++RY 
Sbjct: 13  NPLTEARWARFKANRRGFWSLWIFLLLFVVSLFAELIANDKPLLIQYDGAWYMPIVQRYS 72

Query: 64  ETTFGGEFPLEANYKSPYIQELLKAKDAWTLWAPIPFSYQSINYDLKVPAPAPPSSVNWL 123
           ET FGGEF  EA+Y  PY+  L++ K    +W  I F Y +IN+D+    P+ P SVNWL
Sbjct: 73  ETQFGGEFDTEADYTDPYVVSLIEEKGQ-IIWPLIRFHYDTINFDITGSVPSAPDSVNWL 131

Query: 124 GTDDQGRDVLARVIYGFRVSVLFALTLTVLSSIIGVIAGALQGFYGGWVDLAGQRFLEIW 183
           GTDD+GRDVLAR+IYGFR+SVLF   LTV+SS+IGV+ GA QG+YGGW+DL GQRF+E+W
Sbjct: 132 GTDDKGRDVLARIIYGFRISVLFGFILTVISSLIGVLIGATQGYYGGWLDLFGQRFIEVW 191

Query: 184 SGLPVLYLLIILASFVQPNFWWLLGIMLLFSWMSLVDVVRAEFLRGRNLEYVRAARALGM 243
           SG+P L+LLIIL+SFV+PNFWWLLGIM+LFSWMSLV VVRAEFLR RN +YVRAA+A+G+
Sbjct: 192 SGMPTLFLLIILSSFVEPNFWWLLGIMVLFSWMSLVGVVRAEFLRCRNFDYVRAAQAMGV 251

Query: 244 QNGAIMFRHILPNAMVSTMTFMPFILTGAIGTLTALDFLGFGLPAGSPSLGELVAQGKSN 303
            +  I+ RH+LPNAMV+++T MPFIL+G++ TLT+LDFLGFGLPAGSPSLGEL+AQGK+N
Sbjct: 252 SDMRIILRHMLPNAMVASLTMMPFILSGSVTTLTSLDFLGFGLPAGSPSLGELLAQGKAN 311

Query: 304 LQAPWLGMSAFAVLAIMLSLLVFIGESARDAFDP 337
           LQAPWLG+SAF VL++ML+LLVFIGE+ RDAFDP
Sbjct: 312 LQAPWLGISAFVVLSVMLTLLVFIGEAVRDAFDP 345