Pairwise Alignments

Query, 339 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 363 a.a., mureinpeptideoligopeptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  131 bits (330), Expect = 2e-35
 Identities = 86/242 (35%), Positives = 127/242 (52%), Gaps = 12/242 (4%)

Query: 108 DLKVPAPAPPSSVNWLGTDDQGRDVLARVIYGFRVSVLFALTLTVLSSIIGVIAGALQGF 167
           +L +  PA    +  LGTD  GRDVL+R+IYG R+S+   L    +S ++G++ G L G+
Sbjct: 124 NLHLVCPAEGGQLFLLGTDRLGRDVLSRIIYGARISLTIGLLGITVSFVLGIVIGGLAGY 183

Query: 168 YGGWVDLAGQRFLEIWSGLPVLYLLIILASFVQPNFWWLLGIML-------LFSWMSLVD 220
           +GG  DL  QR +E+   +P + L + LA+ + P  W  L I L       L  W  L  
Sbjct: 184 HGGIFDLVVQRLIEVLQSIPSIPLWLSLAA-IMPATWSPLLIYLGITVILGLLDWTGLAR 242

Query: 221 VVRAEFLRGRNLEYVRAARALGMQNGAIMFRHILPNAMVSTMTFMPFILTGAIGTLTALD 280
            VR++ L  R  +YV AA+ +G ++G I+ RH++P  M   +      + G I   TAL 
Sbjct: 243 AVRSKLLALREEDYVLAAQLMGARSGRIIGRHLVPGFMSHLIATATISIPGMILGETALS 302

Query: 281 FLGFGLPAGSPSLGELVAQGKSNLQA---PWLGMSAFAVLAIMLSLLVFIGESARDAFDP 337
           FLG GL     S G L+ + KS       PWL      V+ ++L+   F+G+  RDA DP
Sbjct: 303 FLGLGLRPPITSWGILLTEAKSVSVIAFYPWLLFPTIPVILVILA-FNFLGDGLRDAADP 361

Query: 338 RK 339
            K
Sbjct: 362 YK 363