Pairwise Alignments

Query, 339 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 291 a.a., oligopeptidemurein peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  134 bits (336), Expect = 4e-36
 Identities = 68/218 (31%), Positives = 120/218 (55%), Gaps = 2/218 (0%)

Query: 123 LGTDDQGRDVLARVIYGFRVSVLFALTLTVLSSIIGVIAGALQGFYGGWVDLAGQRFLEI 182
           LGTD  GRD+++ ++YG R+S++ ++  + L+++IG+ AG    ++G WVD+A  R +++
Sbjct: 70  LGTDGLGRDIVSTILYGLRISLVVSIVSSALAALIGLTAGVSAAYFGKWVDIAIMRLVDL 129

Query: 183 WSGLPVLYLLIILASFVQPNFWWLLGIMLLFSWMSLVDVVRAEFLRGRNLEYVRAARALG 242
              LP + + +I    + P    ++  +++  W +   + R   L   N  Y+ AAR + 
Sbjct: 130 QLSLPTILIALIAIVTLGPGIDRIILALIIAQWATYARIARGVALSEANKPYMDAARLMR 189

Query: 243 MQNGAIMFRHILPNAMVSTMTFMPFILTGAIGTLTALDFLGFGLPAGSPSLGELVAQGKS 302
           +    I+FRH+LPN++   +T +P  +  A+     L FLG G+P   PSLG  VA G  
Sbjct: 190 LPTSRIIFRHLLPNSIAPAVTLIPIEVGHAVALEATLSFLGLGVPIDKPSLGSAVANGFQ 249

Query: 303 NLQAPWLGMSAFAVLAI--MLSLLVFIGESARDAFDPR 338
            L      +S F  LA+  +++ +  +GE  R + DPR
Sbjct: 250 YLLTGQYWISLFPGLALFGLIASINLVGEDVRRSLDPR 287