Pairwise Alignments

Query, 339 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 291 a.a., Probable oligopeptide-transport integral membrane protein ABC transporter OppC from Mycobacterium tuberculosis H37Rv

 Score =  128 bits (322), Expect = 2e-34
 Identities = 77/256 (30%), Positives = 135/256 (52%), Gaps = 6/256 (2%)

Query: 85  LLKAKDAWTLWAPIPFSYQSINYDLKVPAPAPPSSVNWLGTDDQGRDVLARVIYGFRVSV 144
           LL    A+ L   +P+SY  ++++  +    PP + +WLGT+  G+D+LA+ + G + S+
Sbjct: 29  LLLFVSAYALPPLLPYSYDDLDFNALLQ---PPGTKHWLGTNALGQDLLAQTLRGMQKSM 85

Query: 145 LFALTLTVLSSIIGVIAGALQGFYGGWVDLAGQRFLEIWSGLPVLYLLIILASFVQ--PN 202
           L  + + V+S+ I    GA+ G++GGW D      +++   +P   L+ I+    +   N
Sbjct: 86  LIGVCVAVISTGIAATVGAISGYFGGWRDRTLMWVVDLLLVVPSFILIAIVTPRTKNSAN 145

Query: 203 FWWLLGIMLLFSWMSLVDVVRAEFLRGRNLEYVRAARALGMQNGAIMFRHILPNAMVSTM 262
             +L+ ++  F WM    +VR   +  R  E++RAAR +G+ +  I+  H++PN     +
Sbjct: 146 IMFLVLLLAGFGWMISSRMVRGMTMSLREREFIRAARYMGVSSRRIIVGHVVPNVASILI 205

Query: 263 TFMPFILTGAIGTLTALDFLGFGLPAGSPSLGELVAQGKSNLQA-PWLGMSAFAVLAIML 321
                 +  AI   T L FLGFG+     SLG L+A G ++  A PW+ +   ++L ++L
Sbjct: 206 IDAALNVAAAILAETGLSFLGFGIQPPDVSLGTLIADGTASATAFPWVFLFPASILVLIL 265

Query: 322 SLLVFIGESARDAFDP 337
                 G+  RDA DP
Sbjct: 266 VCANLTGDGLRDALDP 281