Pairwise Alignments

Query, 339 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 302 a.a., oligopeptide ABC transporter permease OppC from Pantoea sp. MT58

 Score =  137 bits (345), Expect = 3e-37
 Identities = 73/250 (29%), Positives = 134/250 (53%), Gaps = 4/250 (1%)

Query: 92  WTLWAPI--PFSYQSINYDLKVPAPAPPSSVNWLGTDDQGRDVLARVIYGFRVSVLFALT 149
           + ++AP+   F+Y   ++ + + +P   +S +W GTD  GRD+L RV  G R+S++  + 
Sbjct: 52  FVIFAPMLAHFTYDDTDWSM-MSSPPDTTSGHWFGTDSSGRDILVRVAIGGRISLMVGVA 110

Query: 150 LTVLSSIIGVIAGALQGFYGGWVDLAGQRFLEIWSGLPVLYLLIILASFVQPNFWWLLGI 209
             +++ I+G + G++ G+ GG  D    R LEI +  P ++ +I+L +F   N   +   
Sbjct: 111 SALIAVIVGTLYGSIAGYLGGKTDSVMMRILEILNSFPFMFFVILLVTFFGRNILLIFAA 170

Query: 210 MLLFSWMSLVDVVRAEFLRGRNLEYVRAARALGMQNGAIMFRHILPNAMVSTMTFMPFIL 269
           + + SW+ +  +VR + L  +  E++ AA   G+    I+ RHI+PN +   + +   ++
Sbjct: 171 IGMVSWLDMARIVRGQTLSLKRKEFIEAAHVGGVSTWKIVVRHIVPNVLGVVVVYASLLV 230

Query: 270 TGAIGTLTALDFLGFGLPAGSPSLGELVAQGKSNLQ-APWLGMSAFAVLAIMLSLLVFIG 328
              I   + L FLG G      S G L++ G ++++ +PWL +     L + L    FIG
Sbjct: 231 PSMILFESFLSFLGLGTQEPLSSWGALLSDGANSMEVSPWLLLYPAGFLVVTLFCFNFIG 290

Query: 329 ESARDAFDPR 338
           +  RDA DP+
Sbjct: 291 DGLRDALDPK 300