Pairwise Alignments

Query, 531 a.a., microcin ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 556 a.a., ABC transporter for D-Raffinose, ATPase component (from data) from Sinorhizobium meliloti 1021

 Score =  497 bits (1279), Expect = e-145
 Identities = 269/532 (50%), Positives = 375/532 (70%), Gaps = 8/532 (1%)

Query: 6   LIEIRDLSVEFVTGDHHHRVVNNVSFDIKRGETIALVGESGSGKSVTAHSILRLLPYPLA 65
           +I+ R ++V F   +   + V +VSF + RGET+A+VGESGSGKSVTA +++ LL     
Sbjct: 25  VIDARKVAVSFKVENGTVQAVKDVSFQLYRGETVAIVGESGSGKSVTARTVMGLLSKRAT 84

Query: 66  RHPSGTINYAGQDLLTLKEKTIRHIRGNRIAMIFQEPMTSLNPLHSIEKQINEVLGLHKG 125
             P   I Y G+D+L   ++  R +RG+RI+MIFQEPM+SLNP+++I  QI E +  H+ 
Sbjct: 85  IAPQARIEYDGRDVLKFSKRERRALRGDRISMIFQEPMSSLNPVYTIGSQIIEAIRAHRR 144

Query: 126 LQGKVATQRTLELLDLVGIPEPHKRLKALPHELSGGQRQRVMIAMALANEPELLIADEPT 185
           +  + A +R LELL  V IP+P  RL   PH+LSGGQRQRVMIAMALAN+P++LIADEPT
Sbjct: 145 VSRRAAAERALELLRHVQIPDPEARLNQYPHQLSGGQRQRVMIAMALANDPDVLIADEPT 204

Query: 186 TALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQKGCIVEQADCETL 245
           TALDVTVQ +IL L+++LQ  LGMA++LI+HDL +VR+ +  V VMQ G + E    E L
Sbjct: 205 TALDVTVQAQILNLIRKLQQELGMAVILITHDLTVVRQFSDYVYVMQLGEVKEHNTTEAL 264

Query: 246 FQSPQHPYTQELLAAEPSGGPASNAI---GPPLLEVDNLKVWFPIKK-GFLRNTVDYVKA 301
           F  PQH YT+ LL++EPSG  ++N +    P LL+  N++V F +KK GF R     + A
Sbjct: 265 FADPQHAYTRRLLSSEPSG--SANPLPDDAPILLDGRNVRVSFTLKKGGFFRPEFKELVA 322

Query: 302 VDGINFSLPQGQTLGIVGESGSGKSTLGLAILRLIASKGG-IRFEGQQLDTLSQQQVRPL 360
           VDG++ +L + +TLG+VGESGSGK+T G A++RL+ + GG I FEG+ +    ++ +RPL
Sbjct: 323 VDGLSLNLRRHETLGLVGESGSGKTTFGQALIRLLNTDGGEIYFEGEPIHDKDRKGMRPL 382

Query: 361 RREMQVVFQDPFGSLSPRMCVSEIVGEGLRIHKMGTPAEQEAAIIA-ALKEVGLDPESRH 419
           R ++Q+VFQDPF SL+PRM V +I+ EGL ++ MG   +     +  AL   G+      
Sbjct: 383 RSKIQIVFQDPFSSLNPRMSVGQIIEEGLIVNGMGENRKDRLKRVEDALVSAGMPSNILS 442

Query: 420 RYPHEFSGGQRQRIAIARALVLKPRLILLDEPTSALDRTVQRQVVELLRSLQTKYNLTYL 479
           R+PHEFSGGQRQRIAIARA+ L+P  ILLDEPTSALD +VQ Q++ELLR LQ +  L+YL
Sbjct: 443 RFPHEFSGGQRQRIAIARAVALEPEFILLDEPTSALDLSVQAQIIELLRRLQDERGLSYL 502

Query: 480 FISHDLAVVKALSHQLMVVKHGQVVEQGDAAEIFAAPQHGYTRQLLEAAFLV 531
            ISHDL VV+AL H+++V++ G++VE+G  +E+   P+  YT +L++AAF V
Sbjct: 503 VISHDLKVVRALCHRVVVMQDGKIVEEGPVSEVLNNPKTAYTERLVKAAFEV 554