Pairwise Alignments

Query, 619 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 615 a.a., extracellular solute-binding protein, family 5 (NCBI) from Rhodospirillum rubrum S1H

 Score =  479 bits (1232), Expect = e-139
 Identities = 250/586 (42%), Positives = 359/586 (61%), Gaps = 7/586 (1%)

Query: 13  LALLLASSVVIAAPQPYLTVYGEPAKYAAGFTHFDYANPNAPKGGSLRRSAIEIGRFDHV 72
           LA + A+    + P   L++YG+  KY A FTHFDY NP APKGG++R SA   G FD +
Sbjct: 19  LATVQAAETASSGPMHALSLYGD-IKYPADFTHFDYVNPEAPKGGAIRLSAF--GTFDTL 75

Query: 73  LPYIDKGIGVSQVDGWLYAPLAQRSLDEPYTVYGLVAEKMERADDGLSLRFFLNPKARFA 132
            PY  KG     + G     L   S DEP T YGLVA+ ME A D   L F L P+AR++
Sbjct: 76  NPYTVKGTAAFGI-GLTQTTLTVPSADEPSTEYGLVAQTMELAADRSWLIFTLRPEARWS 134

Query: 133 DGKPITAEDVRYSFDLLMTQGSLRFRTLFADVKHVEVEGERQVRFDFSSNENRTLPLDIA 192
           DG+PITAEDV +SF +L  +G   + + +++V  VEV   ++V+F FS  ENR LP  + 
Sbjct: 135 DGQPITAEDVAFSFQILKDKGQPLYNSYYSNVTGVEVLDAKRVKFTFSPGENRELPSIVG 194

Query: 193 TLPVFPEHWWKTRDFANGGGYEAPLGSGPYKVSKIDSGSTITFTRDPNWWGKDLPVSRGL 252
            LPV P+H+W TRDFA     + P+ +GPY+++  + G  IT+ R  ++W + LPVS+G+
Sbjct: 195 QLPVLPKHYWATRDFAETT-LDQPVSAGPYRIASFEPGRQITYERVKDYWAEALPVSKGM 253

Query: 253 YNFDHLSLEYFGDTEVARQVLRGGAYDFNREFSATGYSIGYNGPALDDGRLQRAHLAKEM 312
            NFD +  +Y+ D  V  +  + GA+DFN E SA  ++  Y  PA+ +G +    +  + 
Sbjct: 254 NNFDRIRYDYYRDVTVTLEGFKAGAFDFNSEHSAKNWATEYKFPAVSEGHVITEKVPVKG 313

Query: 313 PQPAQGYVFNVQKPVFKDRRVRQALAMLWDFEWANRQMMRNMYIRQQSFFSNSPLAATQP 372
           P   QG++FN+++  F+D RVR+ALA  +DFEW N+ +    Y R +SFF NS LAA   
Sbjct: 314 PDREQGFIFNMRRAQFQDPRVREALAYGFDFEWTNQTLFYGQYTRTRSFFENSELAAVGL 373

Query: 373 PTQEELAILEPLRGQVPDEVFTQVFKAPVTD-GSGMIRDKQLQALALLEEAGWKPH-GDK 430
           P  EEL ILEPLR Q+P  VFT+ ++ PVTD   G +R    +AL L++EAGW  +   K
Sbjct: 374 PGPEELKILEPLRAQIPPRVFTEEYQPPVTDEAKGGLRANLKKALDLMKEAGWTVNAAGK 433

Query: 431 LVNAEGEPLEFTFLNAQSGLERLLLPYKRNLAQIGITLNIRRIDASQYVNRVMARDYDMI 490
           +VNA G+P  F  L  Q+ +ER++LP  +N  ++GIT  +R +D  Q+++RV + D+DM+
Sbjct: 434 MVNAAGQPFTFEILLRQADVERMVLPMVKNFERLGITATVRTVDTPQFISRVQSFDFDMV 493

Query: 491 VTGFPVTTSPGMELYNYFGSAAAFDPGANNYMVLKDPAVDSLIKGLVKADTQAQMLTYAH 550
              +  + SPG E  + + S AA  PG +N   LK PAVDSLI+ ++ A T+A ++    
Sbjct: 494 SAVWAQSNSPGNEQRDLWSSTAADIPGTSNLAGLKSPAVDSLIESVIAAPTRADLIARTR 553

Query: 551 ALDRVLQWNYLWIPNYYPPGTSAAWWNRFGRPAIEAKNDEALETWW 596
           ALDRVLQW++ WIP+YY      A+WN FGRPA+        + WW
Sbjct: 554 ALDRVLQWSFPWIPHYYGAFERIAYWNVFGRPAVTPNRGVVFQAWW 599