Pairwise Alignments

Query, 619 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 651 a.a., peptide ABC transporter substrate-binding protein from Burkholderia phytofirmans PsJN

 Score =  370 bits (950), Expect = e-106
 Identities = 216/576 (37%), Positives = 312/576 (54%), Gaps = 17/576 (2%)

Query: 17  LASSVVIAAPQPYLTVYGEPAKYAAGFTHFDYANPNAPKGGSLR-RSAIEIGRFDHVLPY 75
           LA S V A  +P +  Y EP KY  GFTHFDYA+P AP  G L  ++  E+  +D + P+
Sbjct: 41  LALSAVCAQARPSIAQYDEP-KYPVGFTHFDYADPTAPSDGKLSFQNFDELQTYDSLNPF 99

Query: 76  IDKGIGVSQVDGWLYAPLAQRSLDEPYTVYGLVAEKMERADDGLSLRFFLNPKARFADGK 135
           + +G     +   ++  L QRS DE  + Y L+A+ +E A D  S  F +NP ARF++G 
Sbjct: 100 LVRGAPAPDILHLMFDTLMQRSWDELASEYPLIADDVEVAPDLGSATFHINPAARFSNGD 159

Query: 136 PITAEDVRYSFDLLMT-QGSLRFRTLFADVKHVEVEGERQVRFDFSSNENRTLPLDIATL 194
           PITA DV+YSFD L + + S  F   F+ +K   V  +  +RF+F   E R  PL    L
Sbjct: 160 PITAADVKYSFDTLTSPKASPLFNAQFSVIKSATVIDKNTIRFEFKHAE-RDAPLIAGDL 218

Query: 195 PVFPEHWWKTRD--------FANGGGYEAPLGSGPYKVSKIDSGSTITFTRDPNWWGKDL 246
           P+F   W    D         AN    E P+ SGPY +    +   IT+ R+P++W  +L
Sbjct: 219 PIFSPKWGMRADGTRLPFDQIAN----EPPVASGPYLIESRKNDKQITYRRNPDYWAANL 274

Query: 247 PVSRGLYNFDHLSLEYFGDTEVARQVLRGGAYDFNREFSATGYSIGYNGPALDDGRLQRA 306
           P  RG++ F  ++ + + D     +  + G  D   E+SAT ++  Y G   D+G L++ 
Sbjct: 275 PSRRGMFRFASITFKLYRDHYTQLEAFKAGDADALVEYSATQWARKYVGKNFDNGLLKKG 334

Query: 307 HLAKEMPQPAQGYVFNVQKPVFKDRRVRQALAMLWDFEWANRQMMRNMYIRQQSFFSNSP 366
             A + P   QG + N++KP+F+D RVR AL M +D++W NR M    Y R  S+F+ SP
Sbjct: 335 EFA-DGPAQMQGMLMNLRKPMFQDPRVRHALTMAFDYDWMNRMMFYGQYRRTSSYFAASP 393

Query: 367 LAATQPPTQEELAILEPLRGQVPDEVFTQVFKAPVTDGSGMIRDKQLQALALLEEAGWKP 426
             AT  P  +ELA+LEPLR  VP EVF  + K P T     +R     A  LL +AGW  
Sbjct: 394 FGATGMPGPKELALLEPLRASVPPEVFGPMLKQPTTIAPDSLRGNLRVARDLLAQAGWHY 453

Query: 427 HGDKLVNAEGEPLEFTFLNAQSGLERLLLPYKRNLAQIGITLNIRRIDASQYVNRVMARD 486
               L +A G P+    ++ Q G++RL+LPY + L  +GI  ++R ID++ Y  R+   +
Sbjct: 454 RDGALRDANGTPMTIEIMDDQPGMDRLILPYMQALGMLGIQAHMREIDSALYQKRLDNFE 513

Query: 487 YDMIVTGFPVTTSPGMELYNYFGSAAAFDPGANNYMVLKDPAVDSLIKGLVKADTQAQML 546
           YDM    +P  T PG EL   FGSAAA + G+ NY  ++  AVDSLI   + AD    + 
Sbjct: 514 YDMTTFIYPPVTIPGAELTRRFGSAAASEVGSENYPGIRSKAVDSLIHSALSADNLDDLE 573

Query: 547 TYAHALDRVLQWNYLWIPNYYPPGTSAAWWNRFGRP 582
               ALDRVL +++  +P YY PG    + +  G P
Sbjct: 574 AATRALDRVLIYSFYLVPEYYAPGARIGYKSTLGHP 609