Pairwise Alignments

Query, 340 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 376 a.a., oligopeptide uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  151 bits (381), Expect = 3e-41
 Identities = 82/216 (37%), Positives = 125/216 (57%), Gaps = 1/216 (0%)

Query: 125 GTDDQSRDVLARVIFGARVSILFALALTAISAAIGIAAGALQGYYGGWVDLIGQRVLEVW 184
           GTD   RD+L RV+ G ++SI   L  + +S  IG+  GA  GY GG VD +  R++E+ 
Sbjct: 159 GTDSNGRDLLVRVMLGGQISIAVGLLASLVSLGIGVVYGATSGYIGGRVDNVMMRLVEIL 218

Query: 185 SGLPVLYLLIILSGFVEPNFWWLLGIMALFSWLALVDVVRAEFLHGRNLEYVKAARALGL 244
             LP ++L+++L  F   +F  +  ++    WL +  +VR + L  +  E+V AA+ALGL
Sbjct: 219 YSLPFVFLVVVLVVFFGRSFILIFLVIGAVEWLDMARIVRGQTLALKRREFVGAAQALGL 278

Query: 245 GDGKIIRRHILPNAMTATLSYLPFILTGAISTLSALDFLGFGMPAGSASLGELIAQGKQN 304
            D +IIRRHI+PN +   + ++  ++   I   S L FLG G+ A   S G LI++G  N
Sbjct: 279 TDWQIIRRHIIPNTIGPVIVFVTVVVPKVILLESFLSFLGLGVQAPLTSWGALISEGANN 338

Query: 305 LQ-APWLGLTAFFTLALILSLLVFIGEALRDAFDPR 339
           +Q APWL +       + L  L F+G+ LRDA DP+
Sbjct: 339 IQSAPWLLIFPAIFFVVTLFSLNFVGDGLRDALDPK 374