Pairwise Alignments

Query, 523 a.a., microcin ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  555 bits (1429), Expect = e-162
 Identities = 293/521 (56%), Positives = 392/521 (75%), Gaps = 7/521 (1%)

Query: 3   LIEIRDLSVAF--SGQT--VVRNLSLDVRPGECLALVGESGSGKSVTAHSILQLLPEAGT 58
           +++I +LSV F  +GQ   V   +SL +  GE LALVGESGSGKSVTA++IL+LLP+   
Sbjct: 5   VLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLPKGSA 64

Query: 59  E-TTGSIQYRGQELIGASAATLQKLRGNRIAMIFQEPMTSLNPLHSIEKQIGETLLLHKG 117
              +GSI +   + +  S   L+ +RG RI MIFQEPM SLNPLH I KQ+ ETL +H+G
Sbjct: 65  HYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHRG 124

Query: 118 LGGKAAQARILELLDLVGIQKPQERLKAYPHQLSGGQRQRVMIAMALACEPELLIADEPT 177
           L   AA+ + +E L  VGI+ P+ ++ AYPH+LSGG+RQRVMIAMAL  EPELLIADEPT
Sbjct: 125 LRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIADEPT 184

Query: 178 TALDVTVQRKILLLLKSLQKRLGMSLLLISHDLNLVRSIAQRVCVMRAGEIVEQADCQTL 237
           TALDV+VQ +IL LLKSLQ+ LGM++L I+HDL++VR IA RV VM++G++VE   C TL
Sbjct: 185 TALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACHTL 244

Query: 238 FNAPQHPYSRLLLDAEPDADAL-CSDERETVLQVDDLTVQFRLGGGLFRR-KTYLRAVDG 295
           F AP HPY++ L++A+P    +  + +  T+LQ + L V F + GG FRR + Y++AV  
Sbjct: 245 FAAPAHPYTQQLINADPRGVPVPTAMDAPTLLQAEKLRVWFPIKGGYFRRTQAYIKAVTD 304

Query: 296 ISLSVQRGKTLGIVGESGSGKSTLGQAILRLLDSTGSIRFQGEALDPLNNQQMRPWRKQM 355
           +S ++ +G++LG+VGESGSGKST G AIL+LL S G+IRF G+ L  L  ++M P+R +M
Sbjct: 305 MSFTLAKGQSLGLVGESGSGKSTTGMAILKLLASQGAIRFAGQDLQALKRREMLPYRSKM 364

Query: 356 QVVFQDPYGSLSPRMTVEQIISEGLEVHAPCSLADRDAQVIQVLKDVGLDPASRHRYPHE 415
           QVVFQDPY +L+PRM+V Q+I EGL VH+  +  + D  +  V+++VGLD  +RHRYP+E
Sbjct: 365 QVVFQDPYSALNPRMSVAQVIGEGLRVHSQLNDDEIDHAICAVMQEVGLDVDTRHRYPNE 424

Query: 416 FSGGQRQRIAIARALVLKPALMLLDEPTSALDRTVQKQVVALLRELQDKYGLTYLFISHD 475
           FSGGQRQRIAIARALVLKP  +LLDEPTS+LDRTVQ QV+ LL++LQ KY LTYLFISHD
Sbjct: 425 FSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDLQQKYQLTYLFISHD 484

Query: 476 LAVVRAMAHDMIVIKDGQVVERGASHAVFDAPQHPYTKELL 516
           LAV+RA+ H  IV+K G++VE G + ++F+ P HPYT++L+
Sbjct: 485 LAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLV 525



 Score =  178 bits (451), Expect = 5e-49
 Identities = 104/261 (39%), Positives = 159/261 (60%), Gaps = 15/261 (5%)

Query: 267 VLQVDDLTVQFRLGGGLFRRKTYLRAVDGISLSVQRGKTLGIVGESGSGKSTLGQAILRL 326
           VL++D+L+V F + G            +G+SL++ RG+TL +VGESGSGKS    AILRL
Sbjct: 5   VLKIDNLSVGFGIAGQA------RPVTEGVSLTIARGETLALVGESGSGKSVTANAILRL 58

Query: 327 LDS------TGSIRFQGEALDPLNNQQMRPWRK-QMQVVFQDPYGSLSPRMTVEQIISEG 379
           L        +GSI F        + + +R  R  ++ ++FQ+P  SL+P   + + + E 
Sbjct: 59  LPKGSAHYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVET 118

Query: 380 LEVHAPCSLADRDAQVIQVLKDVGL--DPASRHRYPHEFSGGQRQRIAIARALVLKPALM 437
           L +H        + + I+ L  VG+       + YPHE SGG+RQR+ IA AL+ +P L+
Sbjct: 119 LAIHRGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELL 178

Query: 438 LLDEPTSALDRTVQKQVVALLRELQDKYGLTYLFISHDLAVVRAMAHDMIVIKDGQVVER 497
           + DEPT+ALD +VQ Q++ LL+ LQ + G+  LFI+HDL++VR +A  + V++ GQ+VE 
Sbjct: 179 IADEPTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVET 238

Query: 498 GASHAVFDAPQHPYTKELLAA 518
            A H +F AP HPYT++L+ A
Sbjct: 239 NACHTLFAAPAHPYTQQLINA 259