Pairwise Alignments

Query, 220 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 218 a.a., glutamine ABC transporter permease from Herbaspirillum seropedicae SmR1

 Score =  150 bits (379), Expect = 2e-41
 Identities = 77/214 (35%), Positives = 126/214 (58%), Gaps = 1/214 (0%)

Query: 6   NFAAVWRDFPSLLAGLGLGLELALLSIAIGCVIGLMMAFAMLSKHRALRVFASVYVTVVR 65
           +F+ +    P+LL G  + + +    +  G ++GL+        +  L+     YV  VR
Sbjct: 4   DFSVITDSLPALLEGAKVTVLITAAGLVGGTLVGLLAGLMRAYGNTLLKGIGFGYVEFVR 63

Query: 66  NTPILVLILLIYFALPNL-GIRLDKIPSFIITLSLYAGAYLTEVFRAGLLNIPKGLREAG 124
            TPI+V ++ IYFALP L GIR+D + + + ++ + +GAY+ E+ R   L++P+GLREAG
Sbjct: 64  GTPIVVQVMFIYFALPVLLGIRVDPMTAAVTSIVVNSGAYIAEIVRGAFLSVPRGLREAG 123

Query: 125 LAIGLGEWRIRAYITVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYYARKINVES 184
           LA+GL  WR+ A++  PV +R ++PA+ N FI   KDTSL   I V ELT   ++I   +
Sbjct: 124 LALGLPVWRVLAFVIGPVAIRRMVPAMGNQFIVSLKDTSLFIVIGVGELTRQGQEIMAAN 183

Query: 185 YRVIETWLVTTALYVAACYLIAMLLRYLEQRLAI 218
           +R +E W+   A+Y+    ++   LR  E+R+ I
Sbjct: 184 FRAVEIWIAVAAIYLCMIGVMTYALRTFEKRMRI 217