Pairwise Alignments

Query, 282 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 278 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 81.3 bits (199), Expect = 2e-20
 Identities = 66/210 (31%), Positives = 99/210 (47%), Gaps = 11/210 (5%)

Query: 32  LDDVLKRGHLIVGTGSTNAPWHFQGADGKLQGFDIDIGRIVAKGLFNDPS-KVEFVVQSS 90
           LD + +RG L VG  ST  PW  +   G+L GF+ID    VAK L  D   +VEFV  + 
Sbjct: 37  LDAIKERGTLRVGM-STFVPWAMRDKQGELIGFEID----VAKRLAADSGWQVEFVPTAW 91

Query: 91  DARIPNLLTDKVDMSCQFITVTASRAQQVAFTLPYYREGVGLLLPNN--SKYKEIEDLQA 148
           D  IP LL  K D+    ++VT  R++ V FT PY   GV L         + ++ED   
Sbjct: 92  DGIIPALLAKKFDVIIGGMSVTPERSKSVLFTAPYSHSGVQLAANKKLAEGFTQLEDFNK 151

Query: 149 AGDGVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAVNSGRADAAATDQSSVKYLM 208
               V +A  +  +  ++  +  PKA V Q+D     +Q V +G A A        ++  
Sbjct: 152 R--NVKIAARRGAFTVQVARETFPKASVLQFDDDAQAFQEVINGNAHAVIASSPKPEHES 209

Query: 209 VQNPGRYRSP-AYAWSPQTYACAVKRGDQD 237
           +++      P +   S    A AV+ G++D
Sbjct: 210 IKHSDSLFLPFSERLSKGNEAFAVRLGEED 239