Pairwise Alignments

Query, 326 a.a., DNA-binding protein from Pseudomonas simiae WCS417

Subject, 315 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  127 bits (320), Expect = 3e-34
 Identities = 98/323 (30%), Positives = 153/323 (47%), Gaps = 13/323 (4%)

Query: 2   SDSTQRIASDIDQ--MTEVAMLYYLENVTQEAIAKRFDLSRAKVSRLLKRARDEGIVEVR 59
           SD+ +   +D D+  +T +A  YY + +TQ  I ++ ++SR KVSRLL+  R  GI++VR
Sbjct: 3   SDNGEWSYADTDEEILTRIAWYYYNDGLTQNEIGEKLNMSRIKVSRLLESGRRSGIIQVR 62

Query: 60  VLQHPAMNNELERALVERFKLDRALIAVDHSEPDTQRSAVASLVANYLNKTLSDGMIVAV 119
           +         LER + ER+ L  A +     + D     +    A +L + L    ++AV
Sbjct: 63  INSRYQGCLALERRIKERYGLLEAYVVPQLPDQDPS-DRLGQAAAQFLMQRLQPDDLLAV 121

Query: 120 GMGRNVGAVADNV-FLPVTRNCTFVCAIGGSLKAGEYMNPDHICRRLALRFGGESESLYA 178
           G G  V      +  +   RN   V   GG    G Y++           +G     + A
Sbjct: 122 GWGATVSNTIQRLGHVANERNIGLVSLTGG---VGTYVDGMRTAN-----WGSSVHLVPA 173

Query: 179 PALVANPELRGVLINNDTVRSTLDRARRADIALIGIGDMSENSNMVRMGWFSPQEIAQAR 238
           P +V +P++   L +   V + L+ A  A   L+GIG++S  S +VR G+ SP E+   R
Sbjct: 174 PLVVRDPDVARNLSSEPAVANLLEMALNASYQLVGIGELSATSTVVRSGYVSPDEVEPLR 233

Query: 239 LSGTVGDMMGYDFIDIHGQPAVNAIQGRVIGLTVPELFRIPDVVAIASENTKAAATLGAL 298
             G VGD++   F +  G+P    +  RVIG+ +  L R   VVA A    K  A   AL
Sbjct: 234 RKGAVGDIL-CQFYNECGEPLELPLHDRVIGVKLAALSRAEKVVAAAGGIHKVQAIHAAL 292

Query: 299 RSGVINTLATTVTNAHTILALDD 321
              V+  L T  T A  ++ L+D
Sbjct: 293 CGKVVGILITDETTASRLIELED 315