Pairwise Alignments

Query, 325 a.a., xylitol ABC transporter, permease component (from data) from Pseudomonas simiae WCS417

Subject, 325 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  248 bits (633), Expect = 1e-70
 Identities = 142/308 (46%), Positives = 201/308 (65%), Gaps = 7/308 (2%)

Query: 5   TITAPVTAAPRN---RLRLSLDRFGLPLVFILLCVVMAFSSEYFMTWRNWMDILRQTSIN 61
           +IT+   AAP +   R+  ++  +G   +F++L +V +F S+ F+T RN M+++RQ +  
Sbjct: 2   SITSASAAAPSSFTPRVLNAIRHYGTFGIFLVLVIVASFWSDAFLTERNLMNVVRQVASG 61

Query: 62  -GILAVGMTYVILTKGIDLSVGSILAFAG-LCSAMVATQGYGLLAAVSAGMFAGAMLGVV 119
            GI+A+GM +V+LT+GIDLSVGSI A    LC+ +VA QGYG+  A+   +  GA  GVV
Sbjct: 62  AGIMAIGMLFVVLTRGIDLSVGSIAAVGSVLCAHLVAAQGYGVPMAILLVILTGAACGVV 121

Query: 120 NGFMVANLSIPPFVATLGMLSIARGMTFILNDGSPIT-DLPDAYLA-LGIGKIGPIGVPI 177
            GF VA + +P FV +L M++IARG++ I++ G PIT   P A L   G G +  I  P 
Sbjct: 122 TGFFVAYMRLPSFVISLAMMAIARGISLIISAGRPITMGSPGASLVDFGSGFLFGIPQPA 181

Query: 178 IIFAVVALIFWMVLRYTTYGRYVYAVGGNEKSARTSGIGVRKVMFSVYVVSGLLAGLAGV 237
           I+  V+  I  +VL YT++GR V A+G NE++ R SG+ V + + SVYV+SG LA +AG+
Sbjct: 182 ILMLVIYAIGGVVLLYTSFGRIVTAIGSNEEAVRLSGVPVERYVLSVYVISGALAAVAGI 241

Query: 238 VLSARTTSALPQAGVSYELDAIAAVVIGGTSLSGGTGSIVGTLFGALLIGVINNGLNLLG 297
           V + RT    PQ GV  ELD IAAVVIGG SL GG G +  TL GAL++G+I N +NL G
Sbjct: 242 VAAGRTGIGTPQVGVGAELDVIAAVVIGGASLMGGRGGMFNTLLGALILGIITNIMNLAG 301

Query: 298 VSSYYQQV 305
           V  Y+Q V
Sbjct: 302 VPGYHQNV 309