Pairwise Alignments

Query, 335 a.a., xylitol ABC transporter, substrate-binding component (from data) from Pseudomonas simiae WCS417

Subject, 309 a.a., Ribose import binding protein RbsB from Enterobacter sp. TBS_079

 Score =  100 bits (249), Expect = 5e-26
 Identities = 71/252 (28%), Positives = 121/252 (48%), Gaps = 11/252 (4%)

Query: 55  AVKDGTVQLTVFDGNYDALTQNNQIENMVTQRYDAILFVPIDTKAGVGTVKAAMSNDVVV 114
           A K+  V+L V DG   +  Q   +EN +T+     +  P D  A    V      ++ V
Sbjct: 46  AAKEMGVKLQVLDGQGSSPKQVADLENAITRGAQGFIVSPNDVNAVSSAVDEIQDANLPV 105

Query: 115 IASNTKV-ADASVPYVGNDDVEGGRLQAQAMVDKLNGKGNVVIIQGPIGQSAQIDREKGE 173
           +  +  V +   VP+ G ++ +GG+     +  K     +++++ G  G S+ I+R KG 
Sbjct: 106 VTLDRSVDSQKKVPHFGANNYKGGQAIGDFVKSKFPNGADIILLTGQPGSSSNIERTKGI 165

Query: 174 LEVLGKHPD-IKIIEKKTANWDRAQALALTEDWLNAHPKGINGVIAQNDDMALGAVQALK 232
            + L    D  KI+  +T NW R++ + + E  L + PK    +++ NDDMALGA++AL+
Sbjct: 166 RDSLKAGGDKYKIVADQTGNWMRSEGMRIVESVLPSLPKRPQVILSANDDMALGAIEALQ 225

Query: 233 SHGLTSKDVPVTSIDGMPDAIQ-------AAKKDEVTTFLQDAQAQSQGALDV-ALRALA 284
             G+   ++ VT  D +P+A+        A   D+   F     A SQ   +V   +A+ 
Sbjct: 226 GQGVKPGEILVTGFDAVPEALARVRDGWLAVTADQRPGFAVQT-AMSQLVANVREKKAIT 284

Query: 285 GKDYKPQSVIWE 296
           G DY P  +  E
Sbjct: 285 GADYPPTLITKE 296