Pairwise Alignments

Query, 192 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

Subject, 370 a.a., Probable alternative RNA polymerase sigma factor SigG (RNA polymerase ECF type sigma factor) from Mycobacterium tuberculosis H37Rv

 Score = 70.9 bits (172), Expect = 3e-17
 Identities = 55/167 (32%), Positives = 81/167 (48%), Gaps = 24/167 (14%)

Query: 33  LLALASRILGDADEAKDVAQESFLRIWRQAASWRSGEARFDTWLHRVALNLCHDRLRRRK 92
           LLA   R+ G   +A+D+ QE+ LR W+    + +G++   TWLHR+A N C   L  R+
Sbjct: 69  LLAHCYRMTGSLHDAEDLVQETLLRAWKAYEGF-AGKSSLRTWLHRIATNTCLTALEGRR 127

Query: 93  QRPLSEEEVLELADSAAPLDEQLE-------------SAD--------RSARMA--AALA 129
           +RPL        AD +  L E+ E              AD         S R+A  AAL 
Sbjct: 128 RRPLPTGLGRPSADPSGELVERREVSWLEPLPDVTDDPADPSTIVGNRESVRLAFVAALQ 187

Query: 130 ALPERQREAIVLQYYQELSNIDAAALMNISVEALESLLSRARRQLRS 176
            L  RQR  ++L+   +  + + A  +  S  A+ SLL RAR QL++
Sbjct: 188 HLSPRQRAVLLLRDVLQWKSAEVADAIGTSTVAVNSLLQRARSQLQT 234