Pairwise Alignments

Query, 314 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 579 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  156 bits (395), Expect = 1e-42
 Identities = 89/212 (41%), Positives = 120/212 (56%), Gaps = 3/212 (1%)

Query: 95  NGDYVWIRDVVHVVRKD--GEVEALIGFMFDISERKKTEEHLLRLQKQLEEYSYQDGLTG 152
           +G+++W  DVV    +D       ++    D+SER    E L    ++LE  S+ D LT 
Sbjct: 359 DGEFIWF-DVVKSPFRDPASGTNGVLIMARDVSERYLAAEQLEAANQELERLSFLDSLTH 417

Query: 153 IGNRRMFDTVLEREWTSAQRSQLPLSLIILDIDFFKQYNDHYGHIKGDECLRQVAHTLSQ 212
           + NRR FD  L   W    R   PLS+I+ D+D+FK YND YGH+ GDE L+Q+A   +Q
Sbjct: 418 VANRRRFDEQLHTLWHLHVREGKPLSIILCDVDYFKDYNDAYGHLMGDETLKQIAIAFTQ 477

Query: 213 AANRPRDFIARIGGEEFVWLLPETDAQSARQVAQRCLHLIRQQQIEHGFSAVSNLLTLSL 272
            ANR  D +AR GGEEF  LLP T    A  VA+R    +R   I H  S V++ +T+SL
Sbjct: 478 VANRHSDCVARYGGEEFGILLPNTPQSGAILVAERIHEKVRGLAIPHDHSKVADRITVSL 537

Query: 273 GVGTCIVKPDSPMLGFVEEVDKLLYQAKRNGR 304
           G+ T I +P+      VE  D+ LYQAK NGR
Sbjct: 538 GIVTLIPRPEDVPEQMVELADRALYQAKANGR 569