Pairwise Alignments

Query, 833 a.a., ligand-gated channel from Pseudomonas simiae WCS417

Subject, 808 a.a., Ferrichrome-iron receptor @ Ferric siderophore receptor, TonB dependent from Pseudomonas fluorescens FW300-N2E2

 Score =  600 bits (1546), Expect = e-175
 Identities = 341/846 (40%), Positives = 499/846 (58%), Gaps = 55/846 (6%)

Query: 1   MSRLARP-LHPLALSVAMAFAAVPLLTVQSTHAEESSSAVGRFSIPAGDLSQALNSLAEQ 59
           +  L RP L  +A++ A  FA+ PLL      A E +S+V  +++PA  L+  LN +A Q
Sbjct: 5   LDTLLRPSLLAIAIAFATPFASGPLL------AAEQASSVRTYNLPAAPLASTLNQIASQ 58

Query: 60  AGLVLAFDASLTRGKRSQGLSGQYDTDVALTQLLSGSGLQALKLSADRYRLESIPDNGGA 119
           AGL L+ + SL  GK S  + GQ+D   AL + L G+GLQ  + SA  Y L + P+  G 
Sbjct: 59  AGLALSLNPSLASGKTSAPVQGQFDATDALREALRGTGLQLEQSSAGTYSLVAAPE--GV 116

Query: 120 MELQATTISGAYQAESPTGPVSGYVATRSLSGTKTDTALIETPQSISIVTKDQMRAQNAE 179
           M L  T++ GA  +E+  GP  GYVATR+ +GTKTDT ++E P+S+S+VT+ QM  ++  
Sbjct: 117 MALPETSVIGAGLSETAWGPTEGYVATRTAAGTKTDTPIVELPRSVSVVTRQQMEDRSVL 176

Query: 180 SLNQILRYSAAVIPETRGATASRLDQLTIRGFSPATYLDGLRMPSSRDALPQKDAFDLER 239
           +LN  LRY+A V     G+  SR D L +RGF P  +LDGL +P      P+ + ++LER
Sbjct: 177 NLNDALRYTAGVQSSGYGSD-SRNDWLLVRGFIPTQFLDGLPLPKGNYITPKIEPWNLER 235

Query: 240 VEVLRGPASVLYGQGTPSGVINMVSKRPLDTPFHEVGVEYGTFNKKRTTFDLSGPMDDQG 299
           + VLRGPAS +YGQ  P G+++MVS+RP     HEV ++ G++  K+  FD +G +DD+G
Sbjct: 236 IAVLRGPASSVYGQTPPGGMLDMVSRRPQAESSHEVELQAGSYEHKQINFDSTGKVDDEG 295

Query: 300 VYSYRVAGLFDDADGQVEHTETRRQSLSSAFTWRPDDATSLTLLGHFQKDPKGASYGSVP 359
            + YR++G   D++ QV+H   +R +L+ + TW  +D T LT L  + +D  G +   +P
Sbjct: 296 QFLYRLSGTVRDSNSQVDHIPDKRYNLAPSLTWNINDDTRLTFLSQYTRDDTGITGQFLP 355

Query: 360 AWGSVLHSPTGRSIDVDFYDGEKNFEKSDREYYSIGWAFEHHFDDVWTVRQNARYLRSEG 419
             G+ L SP G+ I      G+ ++E  DR YY++G+ FEH  +D W  RQN RY +S+ 
Sbjct: 356 LQGTKLSSPAGK-ISHHKNLGDPDWEFYDRTYYALGYNFEHRLNDTWQFRQNLRYTKSDL 414

Query: 420 QYRSLYSNYLMADYR-----TIRRSTIASDVDLDAYTLDNQVQAKFDTGPLQHTLLMGLD 474
           + + + +     D       T++RS    D D+  + +DN  QA F T  L HTLL+GLD
Sbjct: 415 ESQGITAGTFPPDQAVSPDGTVKRSAGIVDEDISQFAVDNNFQADFQTASLSHTLLLGLD 474

Query: 475 YQ--NTSTDTLSGSGVYTAGPTLDIFNPVYGAAVPVPAYTT--DGTSRSEQTGVYLQEQM 530
           +Q  N+++  L GS   T  P  +I NP+YG       Y T  D   +++QTG+Y+Q+Q+
Sbjct: 475 HQRSNSNSRWLWGS---TGVPDSNIHNPIYGQDFSNVQYFTMYDYNQKTQQTGLYVQDQI 531

Query: 531 KWDKWVLLLGGRYDWASTDNSTQTLSSGAKSKSSLDSKAFTGRIGLVYLFDNGLAPYASY 590
             D W L LGGR DW  T   T+  +    + +  D K F+G   L Y+FDNG+ PY S+
Sbjct: 532 ALDNWRLTLGGREDWIHT--GTEFHNQAGATNTQRDKK-FSGNAALSYVFDNGVTPYISF 588

Query: 591 AESFNPQSGTGYGGS-VFKPTEGKQYEIGIKYQPPGSNSFITAAIFDLRQTNVLTTDPDP 649
           A+SF   +G+    +  FKPTEG+QYE+GIKYQPPG+ + +TAA+FDL Q N   T+ + 
Sbjct: 589 AQSFQAAAGSTVNSTDAFKPTEGEQYEVGIKYQPPGTKTLLTAAVFDLTQQNNSVTENNI 648

Query: 650 THLCGTGRCQSQDGEVQSRGFELEGKASLNDNLDITAAYAYLDNRISKSNNTVRYAPISD 709
           T          Q GEV+ RG ELE    + D+L +  +Y Y D+ I+K            
Sbjct: 649 TR---------QVGEVRVRGLELEASGDVTDSLKLIGSYTYNDSEITKG----------- 688

Query: 710 IGVGPAIAAEGTTTYGVPRHTASAWADYTVHDGKLKGFGVGAGARYVGSSWGDTANT--L 767
                 +A EG     VPRH A+AWADYT H+G L GFGVGAG RYVG ++G+T NT   
Sbjct: 689 -----TVAEEGKRMTQVPRHQATAWADYTWHNGPLDGFGVGAGVRYVGDTYGNTTNTDWG 743

Query: 768 KVPGYTLFDAAVHYDIPNIARLKDNLRLALNATNLANKEYVASCYSYSWCWYGSQRTVQA 827
            V  YT++DA+ HYD+  +      + +A++A N+ NK+Y+++C   S+C+YG QR V A
Sbjct: 744 HVGSYTVYDASAHYDLGRLNNSLKGVSVAVDAKNVFNKDYLSTC-DGSYCYYGDQRNVVA 802

Query: 828 SATYQW 833
           S  Y+W
Sbjct: 803 SVNYKW 808