Pairwise Alignments

Query, 833 a.a., ligand-gated channel from Pseudomonas simiae WCS417

Subject, 703 a.a., TonB-dependent siderophore receptor from Pseudomonas stutzeri RCH2

 Score =  291 bits (745), Expect = 9e-83
 Identities = 207/722 (28%), Positives = 336/722 (46%), Gaps = 57/722 (7%)

Query: 119 AMELQATTISGAYQAESPTGPVSGYVATRSLSGTKTDTALIETPQSISIVTKDQMRAQNA 178
           A  L + TI+     E   GPV GY A R+ S TKTDT + E PQSIS++    ++  ++
Sbjct: 30  AAVLDSVTITA--DQERADGPVQGYRAKRTRSATKTDTPIEEIPQSISVIPASVLQDLDS 87

Query: 179 ESLNQILRYSAAVIPETRGATASRLDQLTIRGFSPAT-YLDGLRMPSSRDALPQKDAFDL 237
               + L ++  V  +      + + + ++RG +    Y DG  +  +R  +   DA ++
Sbjct: 88  PRAEKALDFAGGVARQNDFGGLT-MYEYSVRGLTTGEFYKDGFSV--NRGFMNPPDASNI 144

Query: 238 ERVEVLRGPASVLYGQGTPSGVINMVSKRPLDTPFHEVGVEYGTFNKKRTTFDLSGPMDD 297
           ERVEVL+GP++ LYG+G P G IN+VSKRP    F  + +  G +++ RT  D++ P+D+
Sbjct: 145 ERVEVLKGPSASLYGRGDPGGTINIVSKRPQLDSFARLDLSAGRWDRYRTALDVNTPLDE 204

Query: 298 QGVYSYRVAGLFDDADGQVEHTETRRQSLSSAFTWRPDDATSLTLLGHFQKDPKGASYGS 357
            G   YR+    +D +   +H E  RQ ++ +F+W     T L +     ++ +    G 
Sbjct: 205 DGNMLYRMNIAVEDGNSFRDHREAERQFVAPSFSWELSPDTRLLVQAEVVRNRQTFDRGV 264

Query: 358 VPAWGSVLHSPTGRSIDVDFYDGEKNFEKSDREYYSIGWAFEHHFDDVWTVRQNARYLRS 417
           V   G +     G+     FY GE +      +  ++    EH  ++VWT+R  + Y + 
Sbjct: 265 VAPGGDL-----GKVSRSAFY-GEPSDGPISNDNETLQAELEHDLNEVWTLRLASHYKQG 318

Query: 418 EGQYRSLYSNYLMADYRTIRRSTIASDVDLDAYTLDNQVQAKFDTGPLQHTLLMGLDYQN 477
                +  +  +  D RT+ R+    D D        +++ +FDTG ++H LL+G +Y+ 
Sbjct: 319 RMDGYATEAAAVADDDRTLTRNLRYRDYDWQDAITQLELRGRFDTGSIEHQLLIGTEYER 378

Query: 478 --TSTDTLSGSGVYTAGPTLDIFNPVYGAAVPV--PAYTTDGTSRSEQTGVYLQEQMKW- 532
              S   L  + +      +D++NPVYGA  P   PA T D         + LQ+Q+++ 
Sbjct: 379 YALSEFMLRSNNL----RNIDLYNPVYGAPRPAFNPARTVDRNELVHSRALNLQDQIRFT 434

Query: 533 DKWVLLLGGRYDW--ASTDNSTQTLSSGAKSKSSLDSKAFTGRIGLVYLFDNGLAPYASY 590
           DK   ++G RYD      DN        A  ++    +  T R+G++Y     +  +A+ 
Sbjct: 435 DKLFGVIGARYDHYEQRLDNEV------AGRRTEQTHEKVTPRVGVLYQLVPEVGLFANA 488

Query: 591 AESFNPQSGTGYGGSVFKPTEGKQYEIGIKYQPPGSNSFITAAIFDLRQTNVLTTDPDPT 650
           ++SF P +G  + G+ F P EG  YE G+K         +TAA F L + NVLT+DP   
Sbjct: 489 SQSFKPNNGADFSGATFDPEEGVGYEAGVKLDLFDGRLGLTAAAFHLTKENVLTSDP--- 545

Query: 651 HLCGTGRCQSQDGEVQSRGFELEGKASLNDNLDITAAYAYLDNRISKSNNTVRYAPISDI 710
                   Q   GEV+SRG +L+    L D + +   YAY+D  +++ N           
Sbjct: 546 ---ANDGFQIAAGEVRSRGIDLQLAGQLTDAIRVIGGYAYVDAEVTRDNT---------- 592

Query: 711 GVGPAIAAEGTTTYGVPRHTASAWADYTVHDGKLKGFGVGAGARYVGSSWGDTANTLKVP 770
                  A G+    VPRH+ S    Y   DG L G  +G    YVG   G   +  ++P
Sbjct: 593 ------LASGSRLLNVPRHSGSLLTTYEFLDGDLSGLSLGGAVNYVGDRAGQADSDFELP 646

Query: 771 GYTLFDAAVHYDIPNIARLKDNLRLALNATNLANKEYVASCYSYSWCWYGSQRTVQASAT 830
            YT  D    Y      +  + L L +N  N  ++ Y    YS  W   G  R +  S +
Sbjct: 647 SYTTVDLLARY------KATEKLTLGMNLNNAFDRTYYERSYSNVWVMPGEPRNLSVSLS 700

Query: 831 YQ 832
            +
Sbjct: 701 VE 702