Pairwise Alignments

Query, 833 a.a., ligand-gated channel from Pseudomonas simiae WCS417

Subject, 714 a.a., TonB-dependent siderophore receptor from Sinorhizobium meliloti 1021

 Score =  296 bits (759), Expect = 2e-84
 Identities = 210/696 (30%), Positives = 334/696 (47%), Gaps = 63/696 (9%)

Query: 144 VATRSLSGTKTDTALIETPQSISIVTKDQMRAQNAESLNQILRYSAAVIPETRGATASRL 203
           +AT +    K  T ++  P S+S++T  ++  + A+++ Q+++Y+A V+ +  G+   R 
Sbjct: 76  IATETTGAGKMPTDILIAPASVSVITSKEIEERAADTIEQVVQYTAGVVTDFYGSD-DRY 134

Query: 204 DQLTIRGFSPATYLDGLRMPSSRDALPQKDAFDLERVEVLRGPASVLYGQGTPSGVINMV 263
           D   IRGF+P TY DGL +  +   + +++ +  ER+EVL+G +S  +G   P G +N V
Sbjct: 135 DYFDIRGFTPYTYRDGLAIGRTFAGV-REEPYAFERIEVLKGASSSSFGAAEPGGSVNYV 193

Query: 264 SKRPLDTPFHEVGVEYGTFNKKRTTFDLSGPMDDQGVYSYRVAGLFDDADGQVEHTETRR 323
           +K P    F EV    G+F+ K   FD    +      SYR+ G F  +D + ++++   
Sbjct: 194 TKTPKSDRFGEVYGTGGSFSHKELGFDFGDNLTADETLSYRLTGKFQRSDAEYDYSQDDE 253

Query: 324 QSLSSAFTWRPDDATSLT-LLGHFQKDPKGASYGSVPAWGSVLHSPTGRSIDVDFYDGEK 382
             +    TWRP DATSLT +  H  KD        VP  G     P G   D D + GE 
Sbjct: 254 NFVMGGVTWRPTDATSLTFIFDHLDKD-------GVPGSGG---HPLGTDFDRDQFFGEP 303

Query: 383 N--FEKSDREYYSIGWAFEHHFDDVWTVRQNARYLRSEGQYRSLYSNYLMADYRTIR-RS 439
           +  F +++R  YS+   F+H F +  +   NARY      + S Y      D  T+  R 
Sbjct: 304 DYYFSETNRNSYSV--LFDHDFGNGLSFSSNARYSNLNDGFGSAYIGSTPTDGSTVAGRY 361

Query: 440 TIASDVDLDAYTLDNQVQAKFDTGPLQHTLLMGLDYQNTSTDTLSGSGVYTAGPTLDIFN 499
              ++   D + +D  +  +     ++   L G DY    +D+   +  Y   P++D  +
Sbjct: 362 FFGNEKSTDQFVIDAHLVYEASLDNVESRTLFGADYNKYESDS---ANFYAPAPSIDWED 418

Query: 500 PVYGAAVPVPAYTTDGTSRSEQTGVYLQEQMK-WDKWVLLLGGRYDWASTDNSTQTLSSG 558
           P+Y       A      +  +   +YLQ+ +  +DK  +  G R DW   D S   L +G
Sbjct: 419 PIYSGGPGAMAPYASTNNDQQTNAIYLQQDLTFFDKLTVSFGLRNDW--LDLSETNLLAG 476

Query: 559 AKSKSSLDSKAFTGRIGLVYLFDNGLAPYASYAESFNPQSGTGYGGSVFKPTEGKQYEIG 618
            +     + + FT RIG  Y     LAPY SYAES  P +     GS   PT GKQYE+G
Sbjct: 477 TRRAG--NHREFTTRIGASYKVTEELAPYISYAESAAPPA----AGS--DPTTGKQYEVG 528

Query: 619 IKYQPPGSNSFITAAIFDLRQTNVLTTDPDPTHLCGTGRCQSQDGEVQSRGFELEGKASL 678
           IKY+P    +  TA+++DL + N+   D   T+L  T        +V+ RGFELE KA +
Sbjct: 529 IKYRPDAFPAMFTASVYDLTKGNITVFD-QVTYLPQTVE------KVRHRGFELEAKAEV 581

Query: 679 NDNLDITAAYAYLDNRISKSNNTVRYAPISDIGVGPAIAAEGTTTYGVPRHTASAWADYT 738
            +N+ + AAY+Y+D++I +                P  A +G     VP++ AS W  YT
Sbjct: 582 TNNISVIAAYSYIDSKIEE----------------PGGANDGNRLMRVPKNMASVWGTYT 625

Query: 739 VH-DGKLKGFGVGAGARYVGSSWGDTANTLKVPGYTLFDAAVHYDIPNIARLKDNLRLAL 797
           +  DG       G GARY  + +    NT       +FDAA  Y      ++++N    L
Sbjct: 626 LEGDGARGDMLFGLGARYTDAYYTSITNTTSSESAVVFDAAFTY------KIQENTTFQL 679

Query: 798 NATNLANKEYVASCYSYSWCWYGSQRTVQASATYQW 833
           N  NL ++++VAS  S +  +Y   R++ A+    W
Sbjct: 680 NVNNLFDEKHVASKDSGA-VYYNPGRSILATLRQSW 714