Pairwise Alignments

Query, 833 a.a., ligand-gated channel from Pseudomonas simiae WCS417

Subject, 735 a.a., ferrichrome porin FhuA from Pantoea sp. MT58

 Score =  489 bits (1260), Expect = e-142
 Identities = 287/750 (38%), Positives = 410/750 (54%), Gaps = 55/750 (7%)

Query: 100 ALKLSADRYRLESIPDNGGAMELQATTISGAYQAESPTGPVSGYVATRSLSGTKTDTALI 159
           +L LS   Y  ++       M + A   SGA +AES  GP     A RS +GTKTDT + 
Sbjct: 25  SLSLSTSLYAAQA-----ETMVVSADGGSGA-EAESAWGPAPTVAAKRSATGTKTDTPIE 78

Query: 160 ETPQSISIVTKDQMRAQNAESLNQILRYSAAVIPETRGATASRLDQLTIRGFSPAT---Y 216
           + PQS+S+VT+++M  +N  S+     Y+  V+   RG++   +D L+IRGFS      Y
Sbjct: 79  KNPQSVSVVTREEMEMRNVTSVKGAFNYTPGVLTGNRGSS-DVIDALSIRGFSETNTNQY 137

Query: 217 LDGLRMPSSRDALPQKDAFDLERVEVLRGPASVLYGQGTPSGVINMVSKRPLDTPFHEVG 276
           +DGL++     +    D + LER E+LRGP SVLYG+  P GV+++VSKRP      EV 
Sbjct: 138 MDGLKLQGDNYSEFAIDPYFLERAELLRGPVSVLYGKSNPGGVVSLVSKRPTQETLREVQ 197

Query: 277 VEYGTFNKKRTTFDLSGPMDDQGVYSYRVAGLFDDADGQVEHTETRRQSLSSAFTWRPDD 336
            + G  N   T FD  G +DD GVYSYR+ G     D Q    + +R +++ AF+WRPDD
Sbjct: 198 FQMGNDNLFSTGFDFGGALDDDGVYSYRLTGQARSQDAQQAMNKEKRYTIAPAFSWRPDD 257

Query: 337 ATSLTLLGHFQKDPKGASYGSVPAWGSVLHSPTGRS------IDVDFYDGEKNFEKSDRE 390
            T + LL +FQ +P+   YG +P  G+V+  P  R+      +  +F +GE++  K  R 
Sbjct: 258 RTRVDLLTYFQNEPETGYYGWLPRQGTVV--PITRADGSQYKLPTNFDEGEQS-NKISRT 314

Query: 391 YYSIGWAFEHHFDDVWTVRQNARYLRSEGQYRSLYSNYLMADYRTIRRSTIASDVDLDAY 450
              +G+  EH  +D WT+RQN RY      YRS+Y N    + + I R +  S   L+  
Sbjct: 315 TKMVGYNAEHSLNDTWTLRQNLRYADLRTDYRSIYGNGFTPETQEITRGSAVSHEKLNQL 374

Query: 451 TLDNQVQAKFDTGPLQHTLLMGLDYQNTSTDTLSGSGVYTAGPTLDIFNPVYGAAVPVP- 509
            +D Q QAKF TG + HTLL+G+D+Q T  D       + +   L+  NP YG     P 
Sbjct: 375 AVDTQAQAKFATGQVDHTLLLGVDFQRTRNDI---DAQFGSASNLNAVNPQYGDNSVTPF 431

Query: 510 AYTTDGTSRSEQTGVYLQEQMKWDKWVLLLGGRYDWASTDNSTQTLSSGAKSKSSLDSKA 569
           A      ++  QTG+Y Q+QM+W++WVL LGGRYD+A            A S    + +A
Sbjct: 432 ADPYQHLNKQRQTGLYTQDQMEWNRWVLTLGGRYDYA----MNSVYDRVADSVDRQNDQA 487

Query: 570 FTGRIGLVYLFDNGLAPYASYAESFNPQSGTGYGGSVFKPTEGKQYEIGIKYQPPGSNSF 629
           FT R G+ Y+FDNG+APY SY+E+F P +G+ Y G  F P+  KQYE G+KY P      
Sbjct: 488 FTWRGGVNYVFDNGIAPYFSYSEAFIPNAGSTYDGQAFDPSRAKQYEAGVKYVPKDRPVV 547

Query: 630 ITAAIFDLRQTNVLTTDPDPTHLCGTGRCQSQDGEVQSRGFELEGKASLNDNLDITAAYA 689
           +TAA++ L +T  LT DPD  +         Q GE++SRG ELE KA+LN N+++TA+Y 
Sbjct: 548 LTAALYQLTKTKNLTADPDTKN---HPNFSVQSGEIRSRGVELEAKAALNANVNLTASYT 604

Query: 690 YLDNRISKSNNTVRYAPISDIGVGPAIAAEGTTTYGVPRHTASAWADYTVHDGKLKGFGV 749
           Y D   ++                     +G T   VP++ AS W+DYT H+  L G  V
Sbjct: 605 YTDAEYTEDTQ-----------------LKGKTPVSVPKNMASLWSDYTFHETALSGVTV 647

Query: 750 GAGARYVGSSWG------DTANTLKVPGYTLFDAAVHYDIPNIARLKDNLRLALNATNLA 803
           GAG RYVG S G      +     KV GYT  DAA+ YD+           + +N  NL 
Sbjct: 648 GAGVRYVGESQGLYSTGTEQNQNFKVAGYTTVDAALKYDLGRFG--LPGSTVGVNVNNLF 705

Query: 804 NKEYVASCYSYSWCWYGSQRTVQASATYQW 833
           N+EYVASCY    C++G++R +  +AT+++
Sbjct: 706 NREYVASCYREYACYWGAERKIVGTATFRF 735