Pairwise Alignments

Query, 833 a.a., ligand-gated channel from Pseudomonas simiae WCS417

Subject, 734 a.a., ferrichrome porin FhuA from Klebsiella michiganensis M5al

 Score =  494 bits (1271), Expect = e-144
 Identities = 283/719 (39%), Positives = 405/719 (56%), Gaps = 55/719 (7%)

Query: 134 ESPTGPVSGYVATRSLSGTKTDTALIETPQSISIVTKDQMRAQNAESLNQILRYSAAVIP 193
           ES  GP +   A  S + TKTDT + +TPQSIS+VT+ +M  +   ++ + L Y+  V  
Sbjct: 52  ESAWGPAATIAAKHSATATKTDTPIEKTPQSISVVTRQEMEMKQPTTVKEALAYTPGVF- 110

Query: 194 ETRGATASRLDQLTIRGFSPAT------YLDGLRMPSSRDALPQKDAFDLERVEVLRGPA 247
            TRG++ +  D +TIRGF+ +T      YLDG+++  +  +    D + LERVEV+RGP 
Sbjct: 111 STRGSSTT-YDVVTIRGFTTSTTVNTNQYLDGMKLQGNNYSEVSMDPYFLERVEVMRGPT 169

Query: 248 SVLYGQGTPSGVINMVSKRPLDTPFHEVGVEYGTFNKKRTTFDLSGPMDDQGVYSYRVAG 307
           SVLYG   P G+++MVSKRP   P  E+  + GT N  +T FD S  +DD GV+SYR+ G
Sbjct: 170 SVLYGNSNPGGIVSMVSKRPTTEPLKEIQFKMGTDNLWQTGFDFSDAIDDDGVWSYRLTG 229

Query: 308 LFDDADGQVEHTETRRQSLSSAFTWRPDDATSLTLLGHFQKDPKGASYGSVPAWGSVL-- 365
           L    D Q +  ++ R +++ +F+WRPDD T  T L +FQ DP    YG +P  G+V+  
Sbjct: 230 LGRSQDAQQQMAKSTRYAVAPSFSWRPDDKTDFTFLSNFQSDPYAGYYGWLPREGTVVPY 289

Query: 366 HSPTGRS--IDVDFYDGEKNFEKSDREYYSIGWAFEHHFDDVWTVRQNARYLRSEGQYRS 423
           +   G++  +  DF +GE N  K  R    +G++F H FDD +TVRQN RY      YRS
Sbjct: 290 YDANGKAHKLPTDFNEGEAN-NKMSRRQQMVGYSFSHQFDDTFTVRQNLRYADVHTLYRS 348

Query: 424 LYSNYLMADYRTIRRSTIASDVDLDAYTLDNQVQAKFDTGPLQHTLLMGLDYQNTSTDTL 483
           +Y N      + I R+ + SD  L+ +T+D Q+Q+ F TG + HTLL G+DY     D  
Sbjct: 349 VYGNGYTPTGK-INRAYVRSDEHLNTFTVDTQLQSDFATGAVGHTLLTGVDYSRMRNDVK 407

Query: 484 SGSGVYTAGPTLDIFNPVYGAAVPVPAYTTDGTSRSEQTGVYLQEQMKWDKWVLLLGGRY 543
           +  G  +A   +D+ NP YG       +     +R EQTG+Y Q+QM WDKWV+ LGGRY
Sbjct: 408 ADYGTASA---IDMQNPQYGNPDVSVNFPYSVLNRMEQTGLYAQDQMAWDKWVMTLGGRY 464

Query: 544 DWASTDNSTQTLSSGAKSKSSLDSKAFTGRIGLVYLFDNGLAPYASYAESFNPQSGTGYG 603
           D+A     T+  ++ AK+      + FT R G+ YLFDNG++PY SY++SF P SG+   
Sbjct: 465 DYAMASTLTRPANTLAKN----HDQQFTWRGGINYLFDNGISPYFSYSQSFEPVSGSSRD 520

Query: 604 GSVFKPTEGKQYEIGIKYQPPGSNSFITAAIFDLRQTNVLTTDPDPTHLCGTGRCQSQDG 663
           G  F  + G+QYE G+KY P      +TAA++ L +   LT DP+ +          Q G
Sbjct: 521 GKPFDASHGEQYEAGVKYVPKDMPVVLTAAVYQLTKDKNLTADPNNSSF------SIQTG 574

Query: 664 EVQSRGFELEGKASLNDNLDITAAYAYLDNRISKSNNTVRYAPISDIGVGPAIAAEGTTT 723
           E++SRG ELE KA++N N+++TA+Y Y D +                         G   
Sbjct: 575 EIRSRGIELEAKAAVNANVNVTASYTYTDAQYQHDT-----------------TFNGKRP 617

Query: 724 YGVPRHTASAWADYTVHDGKLKGFGVGAGARYVGS---------SWGDTANTLKVPGYTL 774
             VPR+ AS WADYT H+  L G  VGAGARYVGS         S G    +  V GY L
Sbjct: 618 AEVPRNMASLWADYTFHETALSGLTVGAGARYVGSTVSYYKNNTSTGKKDESFNVAGYAL 677

Query: 775 FDAAVHYDIPNIARLKDNLRLALNATNLANKEYVASCYSYSWCWYGSQRTVQASATYQW 833
            DA V YD+           + +N  NL ++EYV+SCYS   C++G++R V A+AT+++
Sbjct: 678 MDATVKYDLARFG--LPGSSIGVNVNNLFDREYVSSCYSEYACYWGAERQVVATATFRF 734