Pairwise Alignments

Query, 833 a.a., ligand-gated channel from Pseudomonas simiae WCS417

Subject, 711 a.a., TonB-dependent siderophore receptor from Ralstonia sp. UNC404CL21Col

 Score =  479 bits (1232), Expect = e-139
 Identities = 282/720 (39%), Positives = 403/720 (55%), Gaps = 50/720 (6%)

Query: 122 LQATTISGAYQAESPTGPVSGYVATRSLSGTKTDTALIETPQSISIVTKDQMRAQNAESL 181
           L ATT  G  + E+   P  G+VA +S +GTKTDT +IETPQSIS+VT+ Q+  Q    +
Sbjct: 34  LPATTAVG--RGETAQSPGKGFVARQSAAGTKTDTPIIETPQSISVVTQQQLDDQKPRGI 91

Query: 182 NQILRYSAAVIPETRGATASRLDQLTIRGFSPA----TYLDGLRMPSSRDALP--QKDAF 235
           ++ L Y++       GA+ +R D + +RGF+ +    T LDGLR+ S + +    Q D +
Sbjct: 92  SEALNYTSGAFTALVGAS-NRYDYVALRGFNDSSVDNTLLDGLRLMSDQGSYSSFQVDPY 150

Query: 236 DLERVEVLRGPASVLYGQGTPSGVINMVSKRPLDTPFHEVGVEYGTFNKKRTTFDLSGPM 295
            L+R++VL+GP S+LYG+ +P GV+ + SK+PL  P+HEV V  G  N+    FD+SGP+
Sbjct: 151 FLQRIDVLKGPGSILYGRASPGGVVALTSKKPLFQPYHEVEVTVGNRNRLEGAFDISGPI 210

Query: 296 DDQGVYSYRVAGLFDDADGQVEHTETRRQSL--SSAFTWRPDDATSLTLLGHFQKDPKGA 353
           D  GV ++RV GL    D Q EH   +R ++  S A  + PD  T L L  + Q DP+G 
Sbjct: 211 DQNGVMAFRVTGLARGMDTQFEHVREQRFAIAPSLAINFTPD--THLLLQTYLQHDPEGG 268

Query: 354 SYGSVPAWGSVLHSPTGRSIDVDFYDGEKNFEKSDREYYSIGWAFEHHFDDVWTVRQNAR 413
            +  VPA GS+     GR I   F+DG+   EK  R    +G+ FEH F+D  TVRQN R
Sbjct: 269 YHSGVPAEGSIF-PRNGRYISRYFFDGDPTVEKYRRTERMVGYQFEHAFNDRLTVRQNFR 327

Query: 414 YLRSEGQYRSLYSNYLMADYRTIRRSTIASDVDLDAYTLDNQVQAKFDTGPLQHTLLMGL 473
           Y+  + + R +Y  +  A    + R    +     AYT+DNQ++ KF TG ++HT+L GL
Sbjct: 328 YVFGDTRLRQIY-GFGWASADELTRYYSGAKEATHAYTVDNQLEGKFTTGAVKHTMLFGL 386

Query: 474 DYQNTSTDTLSGSGVYTAGPTLDIFNPVYGAAVPVPAYTTDGTSRSEQTGVYLQEQMKWD 533
           DYQ    D    SG  +A P ++ FNPVYG+        +      EQTG+YLQ+Q+  D
Sbjct: 387 DYQKRHVDGFWESG--SADP-INAFNPVYGSPGLTGVTASPVDRWLEQTGLYLQDQIAID 443

Query: 534 KWVLLLGGRYDWASTDNSTQTLSSGAKSKSSLDSKAFTGRIGLVYLFDNGLAPYASYAES 593
           +W L LG R D A   N       G  + S      FT R G+VYLFDNG+APY SY++ 
Sbjct: 444 RWRLTLGVREDHAKASN-----LYGTGTPSEWSGSKFTKRAGVVYLFDNGIAPYFSYSDG 498

Query: 594 FNPQSGTGYGGSVFKPTEGKQYEIGIKYQPPGSNSFITAAIFDLRQTNVLTTDPDPTHLC 653
           FNP       G++ +P   KQ+E G++YQP GS++ ++AA+F+L Q NV T      +  
Sbjct: 499 FNPSLRADQRGNLLQPATAKQFEAGVRYQPKGSSTMLSAAVFNLDQENVATKPVGQIYYV 558

Query: 654 GTGRCQSQDGEVQSRGFELEGKASLNDNLDITAAYAYLDNRISKSNNTVRYAPISDIGVG 713
            +G+       +++RG ELE +  + D + + A Y + + +  +S               
Sbjct: 559 PSGK-------IRTRGVELEARTQVTDTVSVLANYTFTNMKFIES--------------- 596

Query: 714 PAIAAEGTTTYGVPRHTASAWADYTVHDGKLKGFGVGAGARYVGSSWGDTANTLKVPGYT 773
            A    G T Y VPRH ASAW D+T     + G+  G G RYVG+SWGD AN+ KVP YT
Sbjct: 597 -AEGFVGNTPYQVPRHMASAWVDWTF----MPGYTAGMGLRYVGTSWGDNANSFKVPPYT 651

Query: 774 LFDAAVHYDIPNIARLKDNLRLALNATNLANKEYVASCYSYSWCWYGSQRTVQASATYQW 833
           L D  +  D+          +L L+A NL NK YVASC S ++C++G  R V A+ +YQW
Sbjct: 652 LVDLMLRIDLARWDPSLKGAKLQLSAKNLFNKNYVASCLSNAYCYWGDARNVMATISYQW 711