Pairwise Alignments

Query, 531 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 587 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  128 bits (321), Expect = 7e-34
 Identities = 100/351 (28%), Positives = 171/351 (48%), Gaps = 19/351 (5%)

Query: 19  TPLLQSAALVLVLLGLALASLPLYLCLPLALLVIWLPRLKSRAPASAPSEVGDGMGELTR 78
           T L  + A+VL++L L +  +   + L ++ L++ + R+      S  +E+  G  E+T 
Sbjct: 233 TKLSVTIAVVLIIL-LVIFQISRSINLQVSQLLLVIQRIAQSNDISLRAEL-KGNDEITA 290

Query: 79  DLSY----------------TTSHNALSAAAVAYS-VKQLAARLQSQLGAAKQIVSSAEV 121
              Y                T SH   S+ +  +  ++Q+  +   Q      + +S + 
Sbjct: 291 VARYFNSLLDKFEHLISSSQTKSHQLYSSTSSMHDELEQVIEQFNVQSEHMGLMATSVQQ 350

Query: 122 MIGTEKLTSQLSRDALGAASQAHQRSTEGREVLTQSITRMHQLSQRANASRELIEALSLR 181
           M+ T    S+ +  A+   +QA + + +GR V+  ++  +  LS     S+  I +L+  
Sbjct: 351 MVSTISEISESTNIAVDGVNQAARNAEQGRSVVVTTVKNIDLLSSTLQKSQHSIGSLNAF 410

Query: 182 SEEIQRVTLVIQSIASQTNLLALNAAIEAARAGEHGRGFAVVADEVRGLAGRTATATDEV 241
            E+I     +IQ IA QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT  +T+E+
Sbjct: 411 VEKIGGAVSIIQGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTHQSTEEI 470

Query: 242 GVMVADIQQRTVQVVEQIRQLSTDLQTGVEQVEHAGEQLQNIARLSADVEGQVNEIAQGT 301
             +V++IQ +  QVV+ I   +   Q  +       E LQ I R    ++     IA   
Sbjct: 471 TRVVSNIQSQMSQVVDDIDLCNNQGQETLSASRQLDESLQQILRDMHTIQDNSQRIAAAI 530

Query: 302 DTNRTQLDSLFHAVEQMRSDLAVSDQQTRQLADAAVQMEGQAETISERLAE 352
           +   + ++ +  ++ ++ +    + +  +Q       +  QA  + E +AE
Sbjct: 531 EEQGSVMNHVSESIAELNTISENNMRSAQQCLTEVDTVSRQAHAMDEAVAE 581