Pairwise Alignments

Query, 531 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  123 bits (309), Expect = 2e-32
 Identities = 85/277 (30%), Positives = 137/277 (49%), Gaps = 7/277 (2%)

Query: 71  DGMGELTRDLSYTTSHNALSAAAVAYSVKQLAARLQSQLGAAKQIVSSAEVMIGTEKLTS 130
           D +  + R +   T     +   V  +V+      ++Q      + ++AE M  T     
Sbjct: 421 DKLQPIIRRVVDNTGQVVSTTEQVKSTVESTRRSSEAQFKEVDSVATAAEEMTQTSAHVV 480

Query: 131 QLSRDALGAASQAHQRSTEGREVLTQSITRMHQLSQRANASRELIEALSLRSEEIQRVTL 190
           + ++ A+ AAS A + +  G EV+  S  +M+QL  R N +  ++E L+  +  I  +  
Sbjct: 481 ENAQRAVNAASDAQRAAQTGDEVIRHSQMQMNQLVDRMNLAVPVVEELARNNTGIIEILS 540

Query: 191 VIQSIASQTNLLALNAAIEAARAGEHGRGFAVVADEVRGLAGRTATATDEVGVMVADIQQ 250
           VI+ I+ QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT  +  E+  ++  ++ 
Sbjct: 541 VIEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASVGEIRSVINKVEL 600

Query: 251 RTVQVVEQIRQLSTDLQTGVEQVEHAGEQLQNIARLSADVEGQVNEIAQGTDTNRTQLDS 310
            T  VV+ I+  +   Q   EQV  A  QL  +      +    ++I Q     +T    
Sbjct: 601 GTQDVVKAIQGSNETAQATAEQVADAVTQLNRVFSAIHAINEMSHQIVQAAQDQQTVSAQ 660

Query: 311 LFHAVEQMR-------SDLAVSDQQTRQLADAAVQME 340
           +  +V  +R       S+   S++   Q+A  + + +
Sbjct: 661 VTQSVVNIRDLSAQILSETEASEKVGEQIARLSFEQQ 697