Pairwise Alignments

Query, 531 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  132 bits (332), Expect = 3e-35
 Identities = 90/303 (29%), Positives = 144/303 (47%), Gaps = 31/303 (10%)

Query: 56  RLKSRAPASAPSEVGDGMGELTR---DLSYT-------TSHNALSAAAVAYSVKQLAARL 105
           R+     ++    +GD   +L +   DL +        TS        VA ++ ++AA +
Sbjct: 238 RMAQAETSAVIGRIGDASNQLNKFANDLLHNIEKSNILTSEQQAETEQVATAINEMAASI 297

Query: 106 QSQLGAAKQIVSSAEVMIGTEKLTSQLSRDALGAASQAHQRSTEGREVLTQSITRMHQLS 165
           Q     AK   +S+E                      A+  +  G+++++Q+   + +L 
Sbjct: 298 QEVATGAKHAANSSE---------------------SANHETISGQQIVSQASQSITELE 336

Query: 166 QRANASRELIEALSLRSEEIQRVTLVIQSIASQTNLLALNAAIEAARAGEHGRGFAVVAD 225
              + ++++I  L   S +I +V  VI+SIA QTNLLALNAAIEAARAGE GRGFAVVAD
Sbjct: 337 HEVSQAKQVIHELEEHSNDISKVLEVIRSIADQTNLLALNAAIEAARAGESGRGFAVVAD 396

Query: 226 EVRGLAGRTATATDEVGVMVADIQQRTVQVVEQIRQLSTDLQTGVEQVEHAGEQLQNIAR 285
           EVRGLA RT  +T ++  M+  +Q R    V  +   S      VEQ + A + L  I +
Sbjct: 397 EVRGLAARTQQSTMDIQRMIDTLQGRAKLAVAVMEHSSQQALLSVEQAQQAADALTGIGK 456

Query: 286 LSADVEGQVNEIAQGTDTNRTQLDSLFHAVEQMRSDLAVSDQQTRQLADAAVQMEGQAET 345
             +D+ G   ++A   D      D + H++  +R     +    +  A  A  + G +  
Sbjct: 457 RVSDITGMSVQMATAVDQQSAVSDEINHSISNIRMAADTNVDNGKINAKCAEGVAGLSHN 516

Query: 346 ISE 348
           +SE
Sbjct: 517 LSE 519



 Score = 29.3 bits (64), Expect = 4e-04
 Identities = 48/250 (19%), Positives = 99/250 (39%), Gaps = 26/250 (10%)

Query: 162 HQLSQRANASRELIEALSLRSEEIQ----RVTLVIQSIASQTNLLALNAAIEAARAGEHG 217
           +QL++ AN     IE  ++ + E Q    +V   I  +A+    +A  A   AA + E  
Sbjct: 256 NQLNKFANDLLHNIEKSNILTSEQQAETEQVATAINEMAASIQEVATGAK-HAANSSESA 314

Query: 218 RGFAVVADEVRGLAGRTATATD----EVGVMVADIQQRT---VQVVEQIRQLSTD----- 265
               +   ++   A ++ T  +    +   ++ ++++ +    +V+E IR ++       
Sbjct: 315 NHETISGQQIVSQASQSITELEHEVSQAKQVIHELEEHSNDISKVLEVIRSIADQTNLLA 374

Query: 266 LQTGVEQVEHAGEQLQNIARLSADVEGQVNEIAQGTDTNRTQLDSL-------FHAVEQM 318
           L   +E    AGE  +  A ++ +V G      Q T   +  +D+L          +E  
Sbjct: 375 LNAAIEAAR-AGESGRGFAVVADEVRGLAARTQQSTMDIQRMIDTLQGRAKLAVAVMEHS 433

Query: 319 RSDLAVSDQQTRQLADAAVQMEGQAETISERLAEVGLD-DYHQRIYDLAREGASQIAAQF 377
                +S +Q +Q ADA   +  +   I+    ++    D    + D      S I    
Sbjct: 434 SQQALLSVEQAQQAADALTGIGKRVSDITGMSVQMATAVDQQSAVSDEINHSISNIRMAA 493

Query: 378 EADVQQNRIS 387
           + +V   +I+
Sbjct: 494 DTNVDNGKIN 503