Pairwise Alignments

Query, 531 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 598 a.a., methyl-accepting chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  199 bits (507), Expect = 2e-55
 Identities = 161/529 (30%), Positives = 240/529 (45%), Gaps = 41/529 (7%)

Query: 29  LVLLGLALASLPLYLCLPLALLVIWLPRLKSRAPAS---APSEVGDGMGELTRDLSYTTS 85
           L LL  A+    L+  + ++ +V +   L  R   S   A  EV  G G+L+RDL   T 
Sbjct: 68  LDLLSNAILLSTLFTLVMVSFMVWYFRHLIVRPVMSMTRALEEVASGEGDLSRDLPLLTH 127

Query: 86  HNALSAAAV--------------------------AYSVKQLAARLQS---QLGAAKQIV 116
                 A+                           A S+K ++    S   Q   A++++
Sbjct: 128 DEIRGLASTCNLFLAKQREIISSIQGLTVQIAVESARSLKNISDSSDSATDQARFAREVM 187

Query: 117 SSAEVMIGTEKLTSQLSRDALGAASQAHQRSTEGREVLTQSITRMHQLSQRANASRELIE 176
             + + +G+ +  SQ ++      +Q    + +    L +    + Q+S   N    L+ 
Sbjct: 188 DQSNMAVGSIEDVSQQTQGISSTTAQNLSMARDSYAELLEVTGNISQISSSLNEFGGLVS 247

Query: 177 ALSLRSEEIQRVTLVIQSIASQTNLLALNAAIEAARAGEHGRGFAVVADEVRGLAGRTAT 236
            L+ RS  I+ +  +IQ I+SQTNLLALNAAIEAARAGE GRGFAVVADEVR LA   + 
Sbjct: 248 GLNERSSSIKSIVGLIQQISSQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQNVSK 307

Query: 237 ATDEVGVMVADIQQRTVQVVEQIRQLSTDLQTGVEQVEHAGEQLQNIARLSADVEGQVNE 296
           ATD++   +  + Q      EQ  Q+S   +     VE A    +++         ++ +
Sbjct: 308 ATDDISRNIDAMLQEVSSTHEQTIQISQSARETQLVVERASGHFESMIGDFESTNDKLAD 367

Query: 297 IAQGTDTNRTQLDSLFHAVEQMRSDLAVSDQQTRQLADAAVQMEGQAETISERLAEVGLD 356
           IA       +    +   V ++ SD    DQ+ +  A A   +   AE +   L    L 
Sbjct: 368 IAAHIQQFASTNTGINERVTRIYSDSQAIDQRMQHSATATRDLSSVAEQVQALLGRFVLG 427

Query: 357 DYHQRIYDLAREGASQIAAQFEADVQQNRISLDDLFDRSYTLIANTSPSKYHTRFDGYTD 416
             H  + D A   ASQ     +  + +      +LFD+SY LI  T P +Y T   GYT+
Sbjct: 428 --HGEL-DAAITRASQCRDILQVRLAELHKQGVNLFDQSYKLIPGTDPKQYTT---GYTE 481

Query: 417 QVLPAIQE---ALLPRHEGLVFAIACTPQGYVPTHNKAFSHALTGDVQVDAVQNRTKRKF 473
           +     QE    L     G         +GY P +N   S   TG+ +VD    R KR F
Sbjct: 482 RFAQICQEECDKLTKGTRGGKVTFIVDSKGYCPVNNSWVSQKPTGNREVDLPVCRNKRMF 541

Query: 474 EDRTGIRCGSHQQAVLLQTYTRDTGELMHDLSVPIMVKGRHWGGLRLGY 522
            D  G+R   ++Q  LLQTY RDTGE+M ++ VP   +GRHWG LR+G+
Sbjct: 542 SDPIGLRAAGNKQRFLLQTYLRDTGEIMTEIDVPFFFEGRHWGNLRMGF 590