Pairwise Alignments

Query, 531 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 537 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  129 bits (325), Expect = 2e-34
 Identities = 89/250 (35%), Positives = 128/250 (51%), Gaps = 15/250 (6%)

Query: 106 QSQLGAAKQIVSSAEVMIGTEKLTSQLSRDALGAASQAHQRSTEGREVLTQSITRMHQLS 165
           Q    A     +++E+    E++T    + AL  ASQA   +  G  V+ Q ++ M  ++
Sbjct: 289 QQSSAAGTMSAATSEMTASIEEITRHAGQ-ALEMASQAESLAKNGGRVIHQVVSDMDSIA 347

Query: 166 QRANASRELIEALSLRSEEIQRVTLVIQSIASQTNLLALNAAIEAARAGEHGRGFAVVAD 225
           + A  S ++I  L   SE I  +  VI+ IA QTNLLALNAAIEAARAGE GRGFAVVAD
Sbjct: 348 RSAQQSAQVIRTLDKDSEGIFNIIQVIKGIADQTNLLALNAAIEAARAGEQGRGFAVVAD 407

Query: 226 EVRGLAGRTATATDEVGVMVADIQQRTVQVVEQIRQLSTDLQTGVEQVEHAGEQLQNIAR 285
           EVR LAGRT+ +T E+  MVA IQQ T       R+  T ++ GV QV+        + R
Sbjct: 408 EVRSLAGRTSASTQEITAMVARIQQST-------REAVTSMEAGVAQVDKGMAVTAEVER 460

Query: 286 LSADVEGQ-------VNEIAQGTDTNRTQLDSLFHAVEQMRSDLAVSDQQTRQLADAAVQ 338
             +D+          VN+I +         + + H VE + S    + +   Q A    +
Sbjct: 461 AISDILAATLSTTQLVNDITRTIGEQSLASNEIAHQVEMIASMSEGNSRVIGQTASTTDE 520

Query: 339 MEGQAETISE 348
           +   A  +S+
Sbjct: 521 LSVMAGQLSQ 530