Pairwise Alignments

Query, 531 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 678 a.a., methyl-accepting chemotaxis protein from Dechlorosoma suillum PS

 Score =  134 bits (336), Expect = 1e-35
 Identities = 105/374 (28%), Positives = 182/374 (48%), Gaps = 30/374 (8%)

Query: 1   MGAAVSPQAVARGLPGWLTPLLQSAALVLVLLGLALASLPLYLCL-PLALLVIWLPRLKS 59
           +GA+   + +A  +   L   L  +++V  LL  A+    + + L PL+  ++ + RL +
Sbjct: 307 VGASWEDEFLAESMK--LRNFLVISSIVAALLSCAVIFFLVNVRLKPLSEFMVQMDRLGA 364

Query: 60  RAPASAPSEVGDGMGELTRDLSYTTSHNALSAAAVAYSVKQLAARL------------QS 107
                +  +     G   + L ++ +  A +  ++   +   A R+            Q+
Sbjct: 365 GDLTISVRDADGNSGNEVQRLGHSLNVTAANVRSLVGEISAAAGRVNAAASEVENASHQA 424

Query: 108 QLGAAKQIVSSAEVMIGTEKLTSQLSR------DALGAASQAHQRSTEGREVLTQSITRM 161
              A +Q  S++ +    E+++  +S       DA     +A + +  GR ++ +++  M
Sbjct: 425 MDAAEQQSQSASGMAASVEQMSVSISHVAASAGDAAQVGEEAAESTHRGRSIVQKTVEEM 484

Query: 162 HQLSQRANASRELIEALSLRSEEIQRVTLVIQSIASQTNLLALNAAIEAARAGEHGRGFA 221
            +++     S E+I +L  RS++I  +  VI+ IA QTNLLALNAAIEAARAGE GRGFA
Sbjct: 485 ERIAGEIGRSAEVIHSLGERSQQISGIVGVIKEIADQTNLLALNAAIEAARAGEQGRGFA 544

Query: 222 VVADEVRGLAGRTATATDEVGVMVADIQQRTVQVVEQIRQLSTDLQTGVEQVEHAGEQLQ 281
           VVADEVR LA RT+++T E+   +A I   T   V  ++ +S  ++ GVE    AGE LQ
Sbjct: 545 VVADEVRKLAERTSSSTQEIADTIAAITGETQSAVAGMQVVSRQVEAGVEMAREAGEALQ 604

Query: 282 NIARLSADVEGQVNEIAQGTDTNRTQ------LDSLFHAVEQMRSDLAVSDQQTRQLADA 335
            I    A+ E  V+ +    D+ R Q      +  L   + QM  + + +  Q  + A  
Sbjct: 605 VI---DANTEKSVSTVRDIADSTREQSVVSQEIARLVEQIAQMAEEGSATSTQNTEYARN 661

Query: 336 AVQMEGQAETISER 349
              +  + +T  +R
Sbjct: 662 LQTLAQELQTALQR 675