Pairwise Alignments

Query, 531 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 526 a.a., methyl-accepting chemotaxis protein from Dechlorosoma suillum PS

 Score =  305 bits (780), Expect = 4e-87
 Identities = 176/447 (39%), Positives = 253/447 (56%), Gaps = 11/447 (2%)

Query: 88  ALSAAAVAYSVKQLAARLQSQLGAAKQIVSSAEVMIGTEKLTSQLSRDALGAASQAHQRS 147
           A ++  V     ++AA    Q  AA+   ++ +V+       SQ + +    A  A + S
Sbjct: 81  AKASRQVLEEANRVAAGSTQQHDAAQATAAAVDVLSSNMHEVSQRAHETSSIAQFASELS 140

Query: 148 TEGREVLTQSITRMHQLSQRANASRELIEALSLRSEEIQRVTLVIQSIASQTNLLALNAA 207
            EG  ++  +   M ++++    S E++ AL  RS+ I  +   I+ IA QTNLLALNAA
Sbjct: 141 GEGVGIVNDASREMEKIAESVTHSAEVVRALGDRSKAISGIVQTIREIADQTNLLALNAA 200

Query: 208 IEAARAGEHGRGFAVVADEVRGLAGRTATATDEVGVMVADIQQRTVQVVEQIRQLSTDLQ 267
           IEAARAGE GRGFAVVADEVR LA RT+ AT E+  ++  IQ+ T   +  I   +   Q
Sbjct: 201 IEAARAGEAGRGFAVVADEVRKLAERTSLATGEISSVIGSIQEETATAITSIEAGTGQAQ 260

Query: 268 TGVEQVEHAGEQLQNIARLSADVEGQVNEIA----QGTDTNRTQLDSLFHAVEQMRSDLA 323
           +G +    A + L  I   + +   +V+ IA    Q +   +     +   +E  +S+ A
Sbjct: 261 SGADLARQAADSLTRINGGAQETMEKVDAIAGAIEQQSQAGQDIASHVAQIMEMAQSNSA 320

Query: 324 VSD---QQTRQLADAAVQMEGQAETISERLAEVGLDDY--HQRIYDLAREGASQIAAQFE 378
            ++   Q+ RQL   A  ++        RL   G +    H  +  + +E A  +    E
Sbjct: 321 AAELTLQEARQLEYLATNLKEIGNVF--RLGSAGEESVAVHASMPSMVQELAGSVGQLLE 378

Query: 379 ADVQQNRISLDDLFDRSYTLIANTSPSKYHTRFDGYTDQVLPAIQEALLPRHEGLVFAIA 438
             +   +ISL DLFD +Y+ IA T P K+ TRFD   DQ+LP +QE LL RH  +V+AI+
Sbjct: 379 QAIDSGKISLADLFDENYSPIAGTRPQKFSTRFDTLCDQLLPKLQEPLLERHPHVVYAIS 438

Query: 439 CTPQGYVPTHNKAFSHALTGDVQVDAVQNRTKRKFEDRTGIRCGSHQQAVLLQTYTRDTG 498
              +GYVPTHNK FS  LTGD +VD + NRTKR F+D  G RCGSH+Q  LLQTY RDTG
Sbjct: 439 TNRKGYVPTHNKRFSKPLTGDEKVDFINNRTKRVFDDPVGRRCGSHEQPFLLQTYRRDTG 498

Query: 499 ELMHDLSVPIMVKGRHWGGLRLGYKPE 525
           E+MHD+S P+ +KG+HWGG+R+GY+ E
Sbjct: 499 EIMHDISAPVYIKGKHWGGVRIGYRTE 525



 Score = 25.4 bits (54), Expect = 0.005
 Identities = 25/108 (23%), Positives = 41/108 (37%)

Query: 245 VADIQQRTVQVVEQIRQLSTDLQTGVEQVEHAGEQLQNIARLSADVEGQVNEIAQGTDTN 304
           VA+      ++V  I  +   +     +V  A  Q+   A   A    Q ++ AQ T   
Sbjct: 52  VAETSASFNRLVASIHTIIGKVIFNAVEVAKASRQVLEEANRVAAGSTQQHDAAQATAAA 111

Query: 305 RTQLDSLFHAVEQMRSDLAVSDQQTRQLADAAVQMEGQAETISERLAE 352
              L S  H V Q   + +   Q   +L+   V +   A    E++AE
Sbjct: 112 VDVLSSNMHEVSQRAHETSSIAQFASELSGEGVGIVNDASREMEKIAE 159