Pairwise Alignments

Query, 134 a.a., conjugal transfer protein TraR from Pseudomonas simiae WCS417

Subject, 136 a.a., RNA polymerase-binding protein DksA from Rhodopseudomonas palustris CGA009

 Score = 79.3 bits (194), Expect = 2e-20
 Identities = 43/123 (34%), Positives = 74/123 (60%), Gaps = 3/123 (2%)

Query: 12  DDYMNAEQHAFFEKLLQDMKVE--HHERIEQNRIAIESLDTPADPADAASVEEERTWLVN 69
           + +MN  Q  +F   L   K E     ++    +  E+++ P D AD AS E +R   + 
Sbjct: 13  EPFMNERQREYFRAKLLARKDEILREAKLTLQALQEENVNHP-DLADRASSETDRAIELR 71

Query: 70  AIDRDQRMLPQLERALERIKEDSFGWCDDSGEPIGLKRLLISPTTKYCIEAQERHEQIDK 129
           A DR ++++ +++ AL+RI+++++G+C+++GEPI LKRL   P     +EAQERHE+ +K
Sbjct: 72  ARDRQRKLIAKIDAALQRIEDNTYGYCEETGEPISLKRLEARPIATLSVEAQERHEKREK 131

Query: 130 HQR 132
             R
Sbjct: 132 VYR 134