Pairwise Alignments

Query, 340 a.a., Inositol transport system permease protein (from data) from Pseudomonas simiae WCS417

Subject, 320 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  203 bits (516), Expect = 5e-57
 Identities = 126/311 (40%), Positives = 186/311 (59%), Gaps = 25/311 (8%)

Query: 26  IFLVLIGIGLVFELFGWIVRDQSFLMNSQRLVLMILQVSIIGLLAIGVTQVIITTGIDLS 85
           IFL L+ + +VF  F          M     + ++ QV+++ + A G+T VI+   IDLS
Sbjct: 21  IFLSLVMLCIVFSFFN------PRFMTVVNFMNILQQVAVVAIAAFGMTWVILLGEIDLS 74

Query: 86  SGSVLALSAMIAASLAQTSDFSRAVFPSLTDLPVWIPVAMGLGVGLLAGAINGSIIAVTG 145
            GS++A++ M+ A   Q   F     P+         +A+ L  G L G +NG + A   
Sbjct: 75  VGSIIAVAGMVGA---QCFAFGMGFAPA---------IALTLAAGALMGMLNGVLTAKLL 122

Query: 146 IPPFIATLGMMVSARGLARYYTEGQPVSMLSDSYTAIGHGA---MPVIIFLVVAVIF--- 199
           +P FI T+  M   RG+    T G P  + ++++TAIG  +   +P+II+ VVAV+F   
Sbjct: 123 LPSFIVTVATMGIYRGMVSLPTNGAPAMIENETWTAIGTESFLGLPIIIW-VVAVLFVIN 181

Query: 200 HIALRYTKYGKYTYAIGGNMQAARTSGINVKRHLIIVYSIAGLLAGLAGVVASARAATGQ 259
            I L  T +G+  Y  GGN +AA  SGI V R  I+++ I+G++A ++GV+ S+R  + Q
Sbjct: 182 QIVLSKTSFGRRAYLTGGNREAAVYSGIKVDRLKILIFMISGVMAAISGVLLSSRLFSAQ 241

Query: 260 AGMGMSYELDAIAAAVIGGTSLAGGVGRITGTVIGALILGVMASGFTFVGVDAYIQDIIK 319
              GMSYELDAIAAAV+GGTSLAGGVG + GT+IGALI+GVM +G   + V  + Q I+K
Sbjct: 242 TNAGMSYELDAIAAAVLGGTSLAGGVGTMVGTLIGALIIGVMNNGMNMLSVPYFYQLIVK 301

Query: 320 GLIIVVAVVID 330
           GL+I+VAV +D
Sbjct: 302 GLVILVAVWLD 312