Pairwise Alignments

Query, 340 a.a., Inositol transport system permease protein (from data) from Pseudomonas simiae WCS417

Subject, 326 a.a., ribose ABC transporter permease from Pantoea sp. MT58

 Score =  216 bits (549), Expect = 8e-61
 Identities = 129/329 (39%), Positives = 194/329 (58%), Gaps = 22/329 (6%)

Query: 13  PTKSRRRLPTELSIFLVLIGIGLVFELFGWIVRDQSFLMNSQRLVLMILQVSIIGLLAIG 72
           PT  R  +   L    +L  + L+  +FG++  +         L+ +  Q SI  +LA G
Sbjct: 10  PTLKRALMGDLLQTVGILPILILIVAVFGFVTPN---FFTEANLLNITRQASINIVLAAG 66

Query: 73  VTQVIITTGIDLSSGSVLALSAMIAASLAQTSDFSRAVFPSLTDLPVWIPVAMGLGVGLL 132
           +T VI+T GIDLS GS+L  +A++A            +  SL  +   + + M LG GL+
Sbjct: 67  MTFVILTGGIDLSVGSMLGTTAVVA------------LVASLDPMLASLTIPMALGAGLV 114

Query: 133 AGAINGSIIAVTGIPPFIATLGMMVSARGLARYYTEGQPVSMLSDSYTAIGHGAMP---- 188
            G  NG ++A  G+PPFI TLG   + RG A     G  V     ++  IG+G +     
Sbjct: 115 MGLFNGILVAWAGLPPFIVTLGTYTALRGAAYLLANGTTVINSDINFEWIGNGYLGPVPW 174

Query: 189 --VIIFLVVAVIFHIALRYTKYGKYTYAIGGNMQAARTSGINVKRHLIIVYSIAGLLAGL 246
             VI F V+A+ + I LR T  G + YA+GGN+QAAR +GI V   L+ VY ++GLL+GL
Sbjct: 175 LIVIAFAVIAICWFI-LRRTTLGVHIYAVGGNIQAARLTGIKVGVVLLFVYGMSGLLSGL 233

Query: 247 AGVVASARAATGQAGMGMSYELDAIAAAVIGGTSLAGGVGRITGTVIGALILGVMASGFT 306
           AG+++++R  +    +G+ YELDAIAA ++GGTS  GG+G ITGT+IGALI+  + +G T
Sbjct: 234 AGLMSASRLYSANGNLGVGYELDAIAAVILGGTSFVGGIGTITGTLIGALIIATLNNGMT 293

Query: 307 FVGVDAYIQDIIKGLIIVVAVVIDQYRNK 335
            +GV  + Q +IKG +I++AV+ID+YR +
Sbjct: 294 LMGVSYFWQLVIKGAVIIIAVLIDKYRTR 322