Pairwise Alignments

Query, 403 a.a., MFS transporter from Pseudomonas simiae WCS417

Subject, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  149 bits (375), Expect = 2e-40
 Identities = 103/392 (26%), Positives = 173/392 (44%), Gaps = 2/392 (0%)

Query: 5   ALSTGFWLMLLTALIALPRVTLDMHLPALPAMADYFHTSDSQLQLTLTLYALGSAISLLV 64
           +LS       +  L A+ + T  M++P++  MA  F  S + LQ  +  Y +   +S  V
Sbjct: 17  SLSVAKLTFFIAILAAVGQATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFV 76

Query: 65  SGPLTDRFGRRPVLLVGLFLYVLATAACALADNLAVLIIARLFQALGGCCTTVIGRVMVR 124
            G L+DR GR+P+++ GL +Y++ +     A   +  +I    Q LG  C   + R + R
Sbjct: 77  YGTLSDRIGRKPIIIAGLAIYIIGSLIALFAHQYSWFLIGSFVQGLGIGCGGAMSRTLSR 136

Query: 125 DYFDRDEQARLLGLISMAMAISPMAAPVLGSLMLPFINWRGLFVLLGGIGAVLCGVVYRR 184
           D F+  E  ++  LISM +  SP+ APVLG  +     WR  ++ L      +   +   
Sbjct: 137 DCFEGAELHKVNSLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTS 196

Query: 185 LPETRPPEVAAAPPQGLLRLYGQLLRDRYFLRYALAIGCVYSTYFPFISESSALLQRGFH 244
           + ET P    A   + +LR Y  +L DR F  Y + +   ++    F + +  LL     
Sbjct: 197 MVETLP--ATARKKEPVLRSYHYVLSDRRFQGYLICLVATFAGLAVFEAAAGVLLGGVLG 254

Query: 245 LSATAYALVFAATISGYMLGANLFRRLVRRFDPDRLIAVGIGLNLLGSVTLALATTALPG 304
           L AT  +L+F   I GY+ GA L   + R +     + VG+   L GS+ + L       
Sbjct: 255 LPATTVSLLFVLPIPGYLAGAWLSNVIARHWREKTAMHVGLLAILTGSLVIMLPGLLGMT 314

Query: 305 EWLAIVLPMVLIMVSVGMTIPACQLSVLQPYGAIAGTASGLFFFTQMLLTAVSSWATGLL 364
             L+++    +  +  G+  PA     L P+   AGT   +    Q L   +++    + 
Sbjct: 315 TALSLIGGATIYFLGAGILFPAATTGALSPFPYHAGTGGAILGGMQNLGAGLATLFAAMF 374

Query: 365 SDGTSAPLVIMTSVASVLLVTSWLALQQKAAP 396
                 PL I+  + SVL +     +  K  P
Sbjct: 375 PASDQLPLGIIMLLMSVLALWGLKRVYTKQPP 406