Pairwise Alignments

Query, 227 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 224 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  188 bits (478), Expect = 6e-53
 Identities = 104/223 (46%), Positives = 134/223 (60%), Gaps = 1/223 (0%)

Query: 3   RILTIEDDAVTAREIVAELSSHGLDVDWVDNGREGLVRAVSGDYDLITLDRMLPELDGLA 62
           RIL IEDD   AR I   L + G  +  + +G+ GL    S + DL+ LDRMLP +DGL 
Sbjct: 2   RILLIEDDERIARFIERGLKAEGHQIHRLKDGQYGLETVKSSEPDLLILDRMLPHVDGLT 61

Query: 63  IVTTLRTIGVSTPILMISALSDVDERVRGLRAGGDDYLTKPFASDEMAARVEVLLRRKST 122
           +   +R  G    ILM+SAL +V+ER++GLR G DDYL KPF  +E+ AR+E L RR   
Sbjct: 62  LCQQIRATGNQVLILMLSALGEVEERIQGLRTGADDYLAKPFHFEELLARIEALQRRNIQ 121

Query: 123 VQEFETALRVADLELNLISREASRADQPLSLLPTEYKLLEFLMRNTGQILSRMMIFEEVW 182
                  LR ADLEL L +    RA+QP+ L   E  +LE  +R  G I SR  I   VW
Sbjct: 122 THT-SNKLRFADLELCLSTMRVYRAEQPIELTAKEISILELFLRKPGHIFSRERILANVW 180

Query: 183 GYHFDPGTNLIDVHIGRLRKKIDPPGLTPLIRTVRGSGYVIAE 225
           G H DP TN++DV++ RLRKKID P   PLI+T RG GY + +
Sbjct: 181 GIHQDPLTNVVDVYMRRLRKKIDMPFAQPLIQTKRGMGYYLGD 223