Pairwise Alignments

Query, 246 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 244 a.a., Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain from Pseudomonas stutzeri RCH2

 Score =  410 bits (1053), Expect = e-119
 Identities = 205/244 (84%), Positives = 222/244 (90%)

Query: 1   MSSTAQTAEGEKILIVDDDPGLSSLLERFFNSKGYRARAVPNTEQMDRLLGREVFNLVVL 60
           MSSTAQ  EGEKILIVDDD  L  LLERF + +GYR R V NTEQMDRLL RE+F LVVL
Sbjct: 1   MSSTAQANEGEKILIVDDDARLRRLLERFLDEQGYRVRTVENTEQMDRLLSRELFQLVVL 60

Query: 61  DLMLPGEDGLTACKRLRGANNQIPIIMLTAKGDELSRIKGLELGADDYLAKPFNPDELMA 120
           DLM+PGEDGL+AC+RLR  NNQIPIIMLTAKGDE SRI+GLE GADDYLAKPFNP EL+A
Sbjct: 61  DLMMPGEDGLSACRRLREGNNQIPIIMLTAKGDEASRIQGLEQGADDYLAKPFNPRELLA 120

Query: 121 RVKAVLRRQAAPVPGAPGSEDESVTFGDYELSLATRELKRGDEVHMLTTGEFAVLKALVM 180
           R++AVLRRQA  VPGAP SEDE+VTFG+YELSLATRELK+G+EVHMLTTGEFAVLKALV 
Sbjct: 121 RIRAVLRRQAPQVPGAPASEDETVTFGEYELSLATRELKKGNEVHMLTTGEFAVLKALVQ 180

Query: 181 NARQPLTRDKLMNLARGREWDALERSIDVQISRLRRMIEPDPSKPRYIQTVWGVGYVFVP 240
           +AR+PLTRDKLMNLARGREWDALERSIDVQISRLRR+IEPDPSKPRYIQTVWGVGYVFVP
Sbjct: 181 HAREPLTRDKLMNLARGREWDALERSIDVQISRLRRLIEPDPSKPRYIQTVWGVGYVFVP 240

Query: 241 DGNK 244
           DGNK
Sbjct: 241 DGNK 244