Pairwise Alignments

Query, 621 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 465 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Pseudomonas stutzeri RCH2

 Score =  217 bits (553), Expect = 8e-61
 Identities = 150/386 (38%), Positives = 210/386 (54%), Gaps = 34/386 (8%)

Query: 258 LRRRFGQVPEHIGDVFDLDALRAVTHDATQQLPWLGEPGVLHVRVNAPRRK-----PARA 312
           +R+R+ Q+P  +   F   A RAV       + +L +P   +  +   RR       A  
Sbjct: 68  IRKRYPQIPVLLMTAFGAVA-RAVDAMREGAIDYLVKPFEPNTLLELLRRHINGALDAAD 126

Query: 313 AVIPLV-DARVEEHLRLALRVKNRNLPVLVQGETGAGKEVFARQLHERSARHTGPFVAVN 371
           A  P+  DA  ++ L LA RV   +  VL+ GE+G GKEV AR +H++S R   PF+A+N
Sbjct: 127 AEGPVACDASSQQLLGLARRVAQSDSTVLIFGESGTGKEVLARYIHQQSPRSKRPFIAIN 186

Query: 372 CAAIPENLIESELFGYVAGAFTGASSKGMPGLLVQADGGTLFLDEIGDMPLALQTRLLRV 431
           CAAIP+N++E+ LFG+  GAFTGA +   PG   QADGGTL LDEI +MPL LQ +LLRV
Sbjct: 187 CAAIPDNMLEATLFGHEKGAFTGAIAS-QPGKFEQADGGTLLLDEISEMPLGLQAKLLRV 245

Query: 432 MAEGEVAPLGAAKTRAVDIHVICASHRDLSVLVSEGRFREDLFFRLGCARFCLPPLRER- 490
           + E EV  +G  +   +DI V+  ++RDL   V+ GRFREDL++RL        PLR+R 
Sbjct: 246 LQEREVERVGGRRPITLDIRVLATTNRDLVGEVAAGRFREDLYYRLSVFPLSWSPLRQRP 305

Query: 491 TDKLALINRLLEQEARNSRV-SVGIAPSALQLLLGYAWPGNVRQLRHVLAYACAVCEGGT 549
            D L L  RLL   AR  R  S  ++ +A + LLG+ WPGNVR+L + +  A  + +GG 
Sbjct: 306 ADILPLAERLLASRARKMRQGSAQLSAAAQRCLLGHPWPGNVRELDNAIQRALILQQGGL 365

Query: 550 VQ-----------VADLPVEVR-------------GEQVAAPTEDRASPERQVVLDALIR 585
           +Q           VA LP  V               E  +A  +D    E Q+++D L  
Sbjct: 366 IQPEDLCLSGVSNVASLPTPVAVAQTPSDLITEGPRESCSALGDDLRRREFQLIIDTLRA 425

Query: 586 HRWKPLPTAQALGISRATLYRRVNQL 611
            R +   TA  LGIS  TL  ++ Q+
Sbjct: 426 ERGRRKETADRLGISARTLRYKLAQM 451