Pairwise Alignments

Query, 621 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 627 a.a., acetoin catabolism regulatory protein from Sinorhizobium meliloti 1021

 Score =  405 bits (1040), Expect = e-117
 Identities = 252/640 (39%), Positives = 357/640 (55%), Gaps = 52/640 (8%)

Query: 2   LAAHSREHVDCVSRVVRNADRLPQAPVPSLIFDSWRRSMEQHHLDPGSLQGPRILSEPLL 61
           + +HS EH+  + RV R    LP     +++  SW R +E H LDP       I+ E  L
Sbjct: 1   MVSHS-EHIREIERVSRG---LPVRRDETVV-KSWLRCLEHHRLDPAQSCEAYIVPETRL 55

Query: 62  RECRERADLFMRIASEEVGQLHHRVRHADYCVMLTDAQGQTIDHRVDTSIRNDCRKAGLY 121
           RE R++++  + IA   +  L  +V   +Y ++L+D +G T++   D    N  RKAGLY
Sbjct: 56  REHRQQSEDLIAIARSGLENLFRQVAGQNYVLLLSDREGVTVEFLGDPLFGNSLRKAGLY 115

Query: 122 LGTCWSEAEEGTCGVATVLTSQSAVTVHKRDHFRAAFIGLTCSAAPIFDPQGNLLGVMDA 181
           LG+ WSE   GTC V   L +  A+T+H+ DHF      L+C+AAPI+D QG L  V+D 
Sbjct: 116 LGSEWSEWRAGTCAVGACLETGEALTIHQTDHFDNTHTPLSCTAAPIYDIQGELSAVLDI 175

Query: 182 SALKSPDDRRSQHLVRQMVAQSAQAIENAFFMHSARQHWVLQAHSTPGYVDSQPDLLLAW 241
           S L SP  + SQ+L   +V+ + + IE A  M  AR  WVL+   +P ++D  P+  ++ 
Sbjct: 176 SLLSSPILKASQNLALHLVSATVRRIELANLMAQARNQWVLRFSRSPEFLDVDPEAAISI 235

Query: 242 DQDGRLHALNSKARQALRRRFGQ--------VPEHIGDVFDL--DALRAVTH--DATQQL 289
           D  GR+  +     + L R  G         + E +   FD+  D L  +T      ++L
Sbjct: 236 DGLGRIAGMTHAGAKILARSTGLDWRDPQQLIGEPVSRFFDIEVDNLSDLTRRRPTRERL 295

Query: 290 PWLGEPGVL-------HVRVNAP-----------RRKPARAAVIPLVDARVEEHLRLALR 331
            +  +   L       H +V AP           RR    A VI  + A+       A +
Sbjct: 296 VFARDGNALFAHAIEPHSKVRAPLVSREQIPPALRRLGGDAPVIAALQAK-------AAK 348

Query: 332 VKNRNLPVLVQGETGAGKEVFARQLHERSARHTGPFVAVNCAAIPENLIESELFGYVAGA 391
           +    LP+L+QGETG GKE  AR +HE S    GPFVA+NCAAIPE LIESELFGY+ GA
Sbjct: 349 LARTRLPILIQGETGTGKEHLARAIHEGSGLE-GPFVAINCAAIPEQLIESELFGYLPGA 407

Query: 392 FTGASSKGMPGLLVQADGGTLFLDEIGDMPLALQTRLLRVMAEGEVAPLGAAKTRAVDIH 451
           FTGAS+KG  GL+ QADGGTLFLDEIGDMPLALQ+RLLRV+AEGEV P+G    R V I 
Sbjct: 408 FTGASAKGRKGLIEQADGGTLFLDEIGDMPLALQSRLLRVLAEGEVLPVGGTAPRKVRIR 467

Query: 452 VICASHRDLSVLVSEGRFREDLFFRLGCARFCLPPLRERTDKLALINRLLEQEARNSRVS 511
           ++ ASHR L  LVS+G FREDL++RL  A   LP LR+R D   ++ +LL++      + 
Sbjct: 468 IVSASHRPLQTLVSQGAFREDLYYRLNAATLTLPALRDRPDFDWVLEQLLKRHGDGELI- 526

Query: 512 VGIAPSALQLLLGYAWPGNVRQLRHVLAYACAVCEGGTVQVADLPVEVRGEQVAAPTEDR 571
             ++P+AL  L  + WPGN+R+L +V+  A A+ E G V++ DLP     +Q+ A  +  
Sbjct: 527 --LSPAALSALKAHDWPGNIRELDNVIGVAAALAENGVVELGDLP-----DQLLANADTV 579

Query: 572 ASPERQVVLD-ALIRHRWKPLPTAQALGISRATLYRRVNQ 610
              E    L   L    W     A+ LG+ R+T++R++ +
Sbjct: 580 GGNEASATLSLTLTACNWNISEAARRLGLDRSTVHRQIKR 619



 Score = 26.2 bits (56), Expect = 0.005
 Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 9/79 (11%)

Query: 546 EGGTV---QVADLPVEVRGEQVAAPTEDRASP-----ERQVVLDALIRHRWKPLPTAQAL 597
           +GGT+   ++ D+P+ ++   +    E    P      R+V +  ++    +PL T  + 
Sbjct: 424 DGGTLFLDEIGDMPLALQSRLLRVLAEGEVLPVGGTAPRKVRI-RIVSASHRPLQTLVSQ 482

Query: 598 GISRATLYRRVNQLGIDMP 616
           G  R  LY R+N   + +P
Sbjct: 483 GAFREDLYYRLNAATLTLP 501