Pairwise Alignments

Query, 550 a.a., cyclic peptide transporter from Pseudomonas simiae WCS417

Subject, 547 a.a., Putative ATP-binding component of a transport system from Pseudomonas fluorescens FW300-N2E2

 Score =  302 bits (774), Expect = 2e-86
 Identities = 192/533 (36%), Positives = 291/533 (54%), Gaps = 26/533 (4%)

Query: 22  IVTVSVALGMAGGLAITLLLATINNAL-HSPQGMTQGVILTFAALCVLALVSSIISDIGT 80
           +  +S AL  A  +    L+  IN +L H    + +G++L F  L +L  +S + S    
Sbjct: 17  LAILSSALSAATSIG---LIGYINRSLEHGLDDIGRGLLL-FGGLLILLFISGVTSQWLL 72

Query: 81  NYVGQRIIAALRKDLGEKVLSAPIGQIERYRSHRLIPVLTHDVDTISDFSFAFTPLAIA- 139
             +G R++  LR  L  KVL   + +IER  S R+   LT DV T++    AF  L I+ 
Sbjct: 73  VQIGHRLVYQLRLRLVGKVLGTALERIERLGSPRIYNALTKDVTTVAT---AFKQLPISL 129

Query: 140 --ATVTLGCLGYLAYLSVPMFLMMVVAIVIGSAVQFIAGGKGIQGFDLARSHEDELQRYY 197
               + L  L Y+A+LS+P F + +  I +G  +  + G K        R  +D+L   +
Sbjct: 130 YNGLLLLAGLAYMAWLSMPFFFLTLGVIALGVGLDVLLGRKVKTLMQAVRQQDDQLTEQF 189

Query: 198 NAIASGAKELRMHRPRRFRMNTHRIQETADRISDIQVRSVNIYILAKTFGSMLFFVVIGL 257
            A   G  EL + R RR  +   +++  A    +  VR+  ++ +   + ++L FV+IG 
Sbjct: 190 EAAIQGRCELGLSRERRHLLYERKLEPIARASLEASVRADTLWAVNLNWTTLLVFVLIGT 249

Query: 258 ALAMQAYNPNPDPTVITGFVLVLLYMKGPLEHLLGYLPVVGKAKIAFGRISELS----ER 313
              +          V+ G+VL +++++ P+  +L  +P V +  +A   I  L+     +
Sbjct: 250 LFFLGQGLGLLSQQVVVGYVLAIMFLRTPISMILDAIPAVIRGHVALQAIDALALGETVQ 309

Query: 314 FSSPEPHLLMDDSEAPTPIVNSLELRNVSYSPPAVEGSEPFHLGPINLNIAQGDIVFIVG 373
           F +P        ++A  P    L L NV Y  P       F LGPI+L+I +G+++FIVG
Sbjct: 310 FKTP--------AQAAQPF-GELRLSNVHYRYPGQSDEFAFELGPIDLSIRRGELIFIVG 360

Query: 374 ENGSGKTTLIKLLLGLYPPQSGEILLNGEAVTDPERDDYRQLFTTVFADYYLFDDLV-QG 432
            NGSGK+TL KLL GLY P SG++ LNG  +     + +R+ F  +FAD+YLF D++ + 
Sbjct: 361 GNGSGKSTLAKLLTGLYVPTSGQVSLNGVVLDTHTGEWHREHFAAIFADFYLFADVLGEA 420

Query: 433 SATQSLDSATK-YLERLEIAHKVSVKDGVFSTTDLSTGQRKRLALVNAWLEERPVLVFDE 491
              + L++    YL+RL +AHKV    G  STT LS GQRKRLAL+   +E R V + DE
Sbjct: 421 GNHEGLEARVDHYLDRLGLAHKVEFAAGRLSTTALSQGQRKRLALLLLMMEGREVFLLDE 480

Query: 492 WAADQDPAFRRIFYTELLPDLKRLGKTIIVISHDDRYFDIADQLVRLRAGQVV 544
           WAADQDP FR +FY ELLP+LK  GKT+I I+HDDRYFD+AD++ RL  G +V
Sbjct: 481 WAADQDPVFRHVFYNELLPELKAAGKTVIAITHDDRYFDVADRVYRLDYGHLV 533