Pairwise Alignments

Query, 811 a.a., ligand-gated channel from Pseudomonas simiae WCS417

Subject, 703 a.a., TonB-dependent siderophore receptor from Pseudomonas syringae pv. syringae B728a

 Score =  195 bits (495), Expect = 8e-54
 Identities = 186/711 (26%), Positives = 292/711 (41%), Gaps = 68/711 (9%)

Query: 122 LELSPTQVTGNV-LGNITEGSGSYTPGTIATATRLTLTPRETPQSITVITRQHIEDFGLN 180
           +EL    VT +      T     Y     ATAT+      + PQSI+V+    ++D G N
Sbjct: 30  IELESVNVTSDYQYETATSPVQGYRATRSATATKTDTAIADIPQSISVVPASVLKDLGSN 89

Query: 181 NVDDVMRHTPGITVSAYDTDRTNY-YS-RGFSVNSFQYDGIPSTVRNVGYSAGNTLSDMA 238
           NV+  +    G++        T Y YS RGF+ + F  DG  +   N GY A     D A
Sbjct: 90  NVERALDFAGGVSKQNNFGGLTLYEYSIRGFTTSEFYKDGFSA---NRGYPA---TPDAA 143

Query: 239 IYDRVEVLKGATGLLNGAGSLGATINLIRKKPTSEFKGHVQLGAGSWDNYRSEVDVSGPL 298
             +R+EVLKG    L G G  G T+N++ KKP  E    +Q  AGSWD YR+ +DV+ PL
Sbjct: 144 NIERIEVLKGPAASLYGRGDPGGTVNIVSKKPQREAFTTLQTSAGSWDRYRTALDVNTPL 203

Query: 299 TDSGNVRGRAVAAYQDKKSFMDHYSRKTETYYGITEFDLSPDTMLTVGFDY--------Q 350
            + GN+  R   A +D  SF DH   K         + L+PDT L +  ++        +
Sbjct: 204 DEEGNLLSRVNLAVEDNNSFRDHVESKRVFVAPSFSWQLNPDTRLLLETEFVRHTSTFDR 263

Query: 351 DNIPKGSSWSGSFPLVNSNGSINKMPRSYNNGTTWSSWEQNTRTAFAMLEHDMGDGWVTK 410
             +   + WSG    V+ +  + +     +N         N    FA L+H + D W  +
Sbjct: 264 GVVAPNNKWSG----VSRSTFLGEPDDDIDN--------DNNMVQFA-LDHQLNDVWSLR 310

Query: 411 FQLDHKINSYHADLGSIQFVQPA-ADG-TAEINGQKYTGETKSTSADLYATGPFSLFGRE 468
               +K        G     +P  ADG T     ++       +   L   G F   G E
Sbjct: 311 LASHYKQGEMS---GFASEARPLNADGHTVNRRYRERDNNWHDSITQLELRGRFDGLGVE 367

Query: 469 HELVVGGSIGTSRWQGKGYWSPEWPGGNKVDFYNWNGHIAKPIYGPVQQYIDDTIRQTGY 528
           HE+++G      R   +       P    +D YN      KP          + +     
Sbjct: 368 HEVLIGTEYENYRKNERVTTIAGSP--YAIDIYNPVYGQPKPAGARSGTDFYEHVESRAL 425

Query: 529 YMTTRLNVMDDLHVILGGRVANY-----HVTGINPSYKETGRFVPYAGVVYDLNDNISAY 583
            +  ++   D L  ++G R  ++       T    S +    F   AG++Y L   +  +
Sbjct: 426 NLQDQIVFTDKLRGMIGARYEHFDQQVDDFTTNATSGQRQDAFTQRAGLLYQLTPQVGLF 485

Query: 584 ASYTDIFQPQESTYKDRNQKLLEPDEGQNYELGLKGDFLDGRLNASVAYFEVHETNRAIS 643
           A+ +  F+P      D   K  +P+EG  YE+G+K +  D RL+ ++A F + + N    
Sbjct: 486 ANASTSFKPNNGL--DAAGKTFDPEEGVGYEVGIKSELFDHRLSTTLAAFHIEKENVLAL 543

Query: 644 DDAYNNQTPAPSNYAFKGSKAVTKGYEAEVSGELSPGWQVQGGYTHKIVR-DDNDKKIST 702
           D   +              KA ++G++ + +G++S   +V G + +        D+ I T
Sbjct: 544 DPGTDTNRAV--------GKARSQGFDVQFTGQVSEAVRVIGAFAYIDAEVTKGDQSIPT 595

Query: 703 FE-----PEHQVNLNTTYKLKGDLDQFTIGGGLRWQSKGWYEIY--NSPLNTNQDITQKA 755
                   +H  +L   Y+ +         G LR    G    Y  +    +  D    A
Sbjct: 596 GSRILGVAKHSGSLLGVYEFQ--------EGALRGSDVGAAYTYVGDRSGQSGADFELPA 647

Query: 756 YWLVDLMTRYQVTKNLSATVNFNNIFDKSYYTNVGFYNSAAYGEPRNVMFS 806
           Y  VDL+  Y+ + N++  +N NNIFD+ YY         A GEPRNV  S
Sbjct: 648 YQTVDLLAHYKASDNVTVGLNLNNIFDEKYYERSYSNYWVAPGEPRNVTVS 698