Pairwise Alignments

Query, 390 a.a., MFS transporter from Pseudomonas simiae WCS417

Subject, 407 a.a., efflux protein from Sinorhizobium meliloti 1021

 Score =  365 bits (938), Expect = e-106
 Identities = 185/390 (47%), Positives = 255/390 (65%), Gaps = 1/390 (0%)

Query: 1   MANPYAELFQVPGARAFVLAGMLARMPVSMTGIGLITMLSQVHGGYGLAGSVAAVFALAT 60
           M+NPY E+F+ PGA+ F  AG  AR+P++M  IG++ MLSQ HG Y LAG+V+A FAL  
Sbjct: 1   MSNPYGEIFRAPGAKGFSAAGFFARLPIAMAPIGIVAMLSQTHGEYWLAGAVSATFALTN 60

Query: 61  AFCAPQVSRLVDRYSQGRVLPVAALIGGGALLMVLLCTRLQAPNWTLFLFAALAGCMPNM 120
           A  APQ+SRLVDR  Q  V+    +I   A L+++L      P WTLF  A LA  MP++
Sbjct: 61  ALVAPQISRLVDRVGQTAVVVPTTIISVLAFLVLILAANRDWPAWTLFASAFLAAAMPSI 120

Query: 121 SAMVRARWTELYRGQPKLQTAFALESVLDEVCFIIGPPISVGLSVVLFPEAGPLVAALLL 180
            A+VRARWTE++R +P+L TAFA ES  DE+ +I G  +SVGL+VV+FPEAG L++ + L
Sbjct: 121 PALVRARWTEIFRNRPELNTAFAFESSADELVYIAGASLSVGLAVVMFPEAGMLISTIFL 180

Query: 181 AVGVTTFVLQRETEPPVHE-HQDHHGGWLIASPSVLILMILLLAMGVIVGVVDVVSVAFA 239
           A+G   F+LQR TEP V            I    V I+ + L+ +G I    +V +VA  
Sbjct: 181 ALGTAAFILQRSTEPKVRPLEAGVSRASAIRQRPVQIITLALIFVGSIFATAEVSAVAIT 240

Query: 240 QHQGQPAAASIVLSVYAIGSCLAGLAFGTLKLKAPLPRQFLFCGVATALTTLPLLLVSNI 299
           +  GQP AAS+V+ VYA+GS L GLA G L    PL RQ L      A+T++PLLL   +
Sbjct: 241 KELGQPQAASLVIGVYAVGSFLVGLALGALNPTMPLHRQLLIAVSVIAITSVPLLLADTV 300

Query: 300 PGLAVAIFISGLFFAPTLIVSMALVEQIVPASRLTEGMTWLITGLSIGVAIGAASSGWMI 359
           P LA+A+F+SG+  +PT I +  L+E+ VP S LTEG+TW++TG+ IG+A+GA  SGW++
Sbjct: 301 PLLALAVFVSGIAISPTFITAFGLIERRVPESMLTEGVTWVMTGIGIGMALGAFVSGWVV 360

Query: 360 DHFGATSGFWVALVAGAVVLGAAVLGYRRL 389
           D+FGA +GFWV++ AG   +    +G R L
Sbjct: 361 DNFGAQNGFWVSVAAGTATVATIAMGQRSL 390