Pairwise Alignments

Query, 451 a.a., multidrug transporter MATE from Pseudomonas simiae WCS417

Subject, 460 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  127 bits (318), Expect = 1e-33
 Identities = 105/391 (26%), Positives = 181/391 (46%), Gaps = 17/391 (4%)

Query: 41  MLGTQALAAVSGMFPIVFFFIALVIGLGAGASVLIGQAWGAQETAMVKAITGATLTLGAL 100
           +LGTQALAA+S  FP+ F    + +G+G G S  IG+  G  +      ++   L L  L
Sbjct: 55  LLGTQALAAISYTFPVTFAVNCITMGIGVGLSTCIGRLLGQGDGRQAARVSSHGLLLALL 114

Query: 101 VGVVAAVLGSLFARPALQALGTPVDVLDDAVGYAQKMMLIMPLLLVFILYTQLLRGVSDT 160
           +   A+ LG L   P    LG   +++     Y     L +PLL++ +     +R   DT
Sbjct: 115 LVAAASTLGLLTIEPLFLLLGASHELIPLIKEYMVVWYLTIPLLVLPMAGNSAIRATGDT 174

Query: 161 ISPLLALMVSTLVGLLLTPALIRGWVGLPPMGIQSAVYAGL---VGNALAMLFLILRLRH 217
            +P   +M++ L+   L P LI G+   P +GIQ A  A     +G  +  L+L+  ++ 
Sbjct: 175 KTPAKIMMLAGLINGALDPLLIFGYGPFPELGIQGAAIASAFSWLGALIGSLYLL--IKR 232

Query: 218 KNHVMAPDRELLAALRLDRVILGKVLRIGLPTGLQMVVLSLSELVILALVNGHGSQATAA 277
           +  +  P    L  LR D     ++L+IG P  L   +  +S  +++ +++ HG+ A AA
Sbjct: 233 EKLLAIPS---LPHLRDD---WQQILKIGTPAALSTAMNPISGALLMIMLSSHGTAAVAA 286

Query: 278 YGAVTQIVNYVQFPALSIAITASILGAQAIGAGRLERIGPILRTGLLINTCLTGGLIVLG 337
           YGA  +I + +    +S+    +   AQ +GA    R    L   L  +      + ++ 
Sbjct: 287 YGATQRIESILILVLMSLTSALTPFMAQNLGAQNPARSFAGLFLSLRFSLLFQLMVFIMM 346

Query: 338 YVLSHWLLGLFITDDAARVNAEHLLHIMLWSILVFGFQAVIGGIMRASGVVLMPVVI--- 394
             LS  L  LF  + A R   + L H +L   + +GFQ V+  ++ A   +  P+     
Sbjct: 347 VPLSIPLAALFSQEQAVR---DLLWHYLLVVPVSYGFQGVVMMLVSALNALHQPLKAFQW 403

Query: 395 SIFCVLCVELPMAYLLNAHFGLEGVWMAFPV 425
           S   +    LP A++    + +EG+++   V
Sbjct: 404 SFMRLFVFTLPAAWIGGRLYNIEGLFIGIAV 434