Pairwise Alignments

Query, 451 a.a., multidrug transporter MATE from Pseudomonas simiae WCS417

Subject, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

 Score =  103 bits (257), Expect = 1e-26
 Identities = 103/448 (22%), Positives = 203/448 (45%), Gaps = 40/448 (8%)

Query: 19  PMVLSNFLQSFSGTLNGIYVGQMLGTQALAAVSGMFPIVFFFIALVIGLGAGASVLIGQA 78
           PMV++   QS    ++ I+V   LG+ ALAA+   FP +F  +A+  G+G G S  I + 
Sbjct: 24  PMVIAMSFQSLYNVIDAIWVAG-LGSDALAAIGLFFPFMFAIMAISNGVGIGGSSAISRR 82

Query: 79  WGAQETAMVKAITGATLTLGALVGV----VAAVLGSLFARPALQALGTPVDVLDDAVGYA 134
            G         I   ++ LG ++G+    V   LG++F+   + A G  V +   AV Y+
Sbjct: 83  IGQNNKDAADNIAVHSIVLGIIIGILLIGVIPFLGAIFS--LIGASGITVTM---AVEYS 137

Query: 135 QKMMLIMPLLLVFILYTQLLRGVSDTISPLLALMVSTLVGLLLTPALIRGWVGLPPMGIQ 194
             +     +LL   +   +LRG  DT   + A+++ +++ ++L P  I     +  MG+ 
Sbjct: 138 TILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFIY----VLNMGVA 193

Query: 195 SAVYAGLVGNALAMLFLILRLRHKNHVMAPDRELLAALRLDRVILGKVLRIGLPTGLQMV 254
            A +A L+   +  +  +  L  K       +      +LD  I+ ++  IGLP  +  +
Sbjct: 194 GAAWATLLSLVITGILFVYWLFIKKDTFL--KISFEKFKLDINIIKEIFSIGLPASISHL 251

Query: 255 VLSLSELVILALV-NGHGSQATAAYGAVTQIVNYVQFPALSIAITASILGAQAIGAGRLE 313
            ++ S  ++ A+V    G+   A +    +IV+    P + +A   +++   A G+   E
Sbjct: 252 TMAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGLATGVTVVTGAAYGSANPE 311

Query: 314 RI----GPILRTGLLINTCLTGGLIVLGYVLSHWLLGLFITDDAARVNAEHLLHIMLWSI 369
           ++       L+ G+L+ T +   +++    +++    LF   + +    E LL  + +  
Sbjct: 312 KLEISYKYALKMGILVETIIAALILIFENQITY----LFTYSENSVHILEGLLVFLKYMF 367

Query: 370 LVFG-------FQAVIGGIMRASGVVLMPVVISIFCVLCVELPMAYLLNAHF--GLEGVW 420
           L +          A+  G+ + +      + IS+   + +++PMAY     F  GL GVW
Sbjct: 368 LFYPTLPLGMLTAAMFQGVSKGNN----SLFISLLRTIILQIPMAYTFGIIFNQGLTGVW 423

Query: 421 MAFPVTYLAMLALQTAYYRLVWRHKQIK 448
               + +  ++A+  AY   ++  +Q K
Sbjct: 424 FGMILGH--VIAVSIAYLLGIYTIRQFK 449