Pairwise Alignments

Query, 546 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  223 bits (567), Expect = 2e-62
 Identities = 168/506 (33%), Positives = 263/506 (51%), Gaps = 35/506 (6%)

Query: 63  NRAIAIRDAVLVKDEAALN---------RHLAEIDQLKRDYQDSAVMLDRLFANTTAS-- 111
           +R + +RD  L+ D  A+            +    Q + D +++   + RL+ +  ++  
Sbjct: 46  DRVVPLRDLKLIADLYAVKIVDTTHKTRSGMLTYGQARDDVRNARGEIRRLWGDFMSTKL 105

Query: 112 --AEE---TRLLGDIKAIETQALASTERVINLRRSNDTAG--AQDL--LLAQASVHYTEW 162
             AE    TRL G +KA +   L   ER+++       A     DL  L+   S  ++E 
Sbjct: 106 IEAERRVVTRLEGLMKAADAP-LDDLERILDRHSEKRLAAFVVNDLYPLIDPISEGFSE- 163

Query: 163 LKRVNALIDFEEAHIKQRLDTVQSAAGTFAMLMVLASAVAIILSVLVSLLIIRKVKATLG 222
                 LI  +    K   D   +      +L +      +I   L +++++R +   L 
Sbjct: 164 ------LIHLQLGEAKAEYDEALALYERNRVLNIGLLLALLIGGGLFAMVLLRSISRPL- 216

Query: 223 AEPEEVAEAIRRLADGELNQRIETRYPDSVMGI---LKNALARLSDTISEVRSAAQALRH 279
              EE+ +A   +A G+L++ I  R  D +  +   ++     L DT+ +++ +A  L  
Sbjct: 217 ---EELKQAAASVAAGDLSRTIACRGKDEITEVQQSIRQMQQTLRDTLQDIQGSATQLAS 273

Query: 280 SSVTLLSVASDNRQQINLQTSEAQHVAAAITQMAASVSEVSGYASAASKATILADAEVDS 339
           ++  L +V     Q I+ Q  E Q  A A+T+M+A+V EV+G A+  S A+  A+   D 
Sbjct: 274 AAEELHAVTQHTAQGIHQQNEEVQMAATAVTEMSAAVDEVAGNANRTSDASRDAETVADD 333

Query: 340 GHRLVGEVTVSIEELATILDHATLRVNQVSSDSENIETVIEVINAIAAQTNLLALNAAIE 399
           G R V     +I++L+  L      V +++ ++ +I  V++VI AIA QTNLLALNAAIE
Sbjct: 334 GRRQVTATRQTIDQLSEKLQQTAGTVTRLAEEAASIGQVVDVIRAIADQTNLLALNAAIE 393

Query: 400 AARAGEHGRGFAVVADEVRSLATRTQESTQEIRDMIGKLQSGTQDAADIMQRSRSLAQTT 459
           AARAGE GRGFAVVADEVR+LA RTQ STQEI  MIG +QS T+ +   MQ+S   A  +
Sbjct: 394 AARAGEAGRGFAVVADEVRNLAQRTQSSTQEIERMIGAIQSATEQSVRDMQQSSEFATRS 453

Query: 460 VTQTRDSQLALGKISQEVGAINAMNAQIASVSVQQSAAAEEVAQNVTRIHSSTVQSAAGS 519
            T   ++  ALG I++ VG IN MN  IAS + +Q+  A EV +N+  I   + QSA G+
Sbjct: 454 QTMAGEADQALGLIAERVGQINEMNLVIASAAEEQAQVAREVDRNLVAIRDISEQSATGA 513

Query: 520 EQVENSNHELAELADRLSTKVAFFNV 545
           +Q   ++ ELA LA  L+  V  F +
Sbjct: 514 QQTSVASDELARLATHLNQLVGRFRL 539