Pairwise Alignments

Query, 546 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 642 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  200 bits (508), Expect = 2e-55
 Identities = 129/359 (35%), Positives = 197/359 (54%), Gaps = 17/359 (4%)

Query: 195 MVLASAVAIILSVLVSLLIIRKVKATLGAEPEEVAEAIRRLADGELNQRIETRYPDSVMG 254
           ++  + + ++L +  ++LI R++   L    +    A RR+ADG+L   + T   D  +G
Sbjct: 293 LLTVAVIVLLLGIFAAILITRQITRPL----DSTVIAARRIADGDLTNDLSTTRQDE-LG 347

Query: 255 ILKNALARLSDTISEVRSAAQALRHSSVTLLSVASDNRQQINLQTS--------EAQHVA 306
           +L+N +  ++ ++  +         + VT ++ A++    ++ QTS        E   VA
Sbjct: 348 LLQNTMQHMTVSLRTLIGGIS----NGVTQIATAAEELSAVSEQTSAGVTQQKLEVDQVA 403

Query: 307 AAITQMAASVSEVSGYASAASKATILADAEVDSGHRLVGEVTVSIEELATILDHATLRVN 366
            A+ QMA++V EV+     AS+A   A      G  +V   T  I +LA  +      + 
Sbjct: 404 TAMNQMASTVQEVAQNTEDASQAARQASDRAAHGSSVVQHATREISQLAGEVGQLGEAMQ 463

Query: 367 QVSSDSENIETVIEVINAIAAQTNLLALNAAIEAARAGEHGRGFAVVADEVRSLATRTQE 426
           ++  DS+ I  VI+VI A+A QTNLLALNAAIEAARAGE GRGFAVVADEVRSLA RTQ 
Sbjct: 464 RLIQDSDKIGGVIDVIKAVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQS 523

Query: 427 STQEIRDMIGKLQSGTQDAADIMQRSRSLAQTTVTQTRDSQLALGKISQEVGAINAMNAQ 486
           ST EI  +I  LQ GT  A+++M  SR   + TV   R ++ +L +I+  +  I  M+ Q
Sbjct: 524 STTEIEALIKSLQDGTGAASELMNASRQRTEGTVALARQAEESLLEITHSIVTIEQMSQQ 583

Query: 487 IASVSVQQSAAAEEVAQNVTRIHSSTVQSAAGSEQVENSNHELAELADRLSTKVAFFNV 545
           I++ + +QSA  +E+ ++V  +     QSA  +EQ   S  ELA L   L   VA F +
Sbjct: 584 ISAAAEEQSAVTDEINRSVISVRDIADQSATATEQSAASTVELARLGSNLQDMVARFRI 642