Pairwise Alignments

Query, 546 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 673 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  209 bits (532), Expect = 3e-58
 Identities = 144/442 (32%), Positives = 244/442 (55%), Gaps = 16/442 (3%)

Query: 108 TTASAEETRLLGDIKAIETQALASTERVINLRRSNDTAGAQDLLLAQASVHYTEWLKRVN 167
           +T + + T++L  ++  +T     + ++ + + +++       L+ + ++  TE +KR+ 
Sbjct: 244 STLNDDSTKVLKMLEGKDTLVTLKSRQIDSTQLTSEKL----TLVEKNALTVTEQMKRLA 299

Query: 168 ALIDFEEAHIK-QRLDTVQSAAGTFAMLMVLASAVAIILSVLVSLLIIRKVKATLGAEPE 226
             I+     I  Q L+ + SA+    +L+V    +AI+++V++S  ++R +K +L    +
Sbjct: 300 KDIETVTNDISNQALNDINSASLRTLILVV----IAIVVAVVISFAVVRPLKRSL----D 351

Query: 227 EVAEAIRRLADGELNQRIETRYPDSVMGILKNA---LARLSDTISEVRSAAQALRHSSVT 283
           EV  A+  LA G+L  +++    D    + +N    +  L   I+ +   +  L  ++  
Sbjct: 352 EVNGALNVLASGDLTHKLDDTGHDEFAELSRNCNRLVDSLRSLIASILDRSNQLAAAAEE 411

Query: 284 LLSVASDNRQQINLQTSEAQHVAAAITQMAASVSEVSGYASAASKATILADAEVDSGHRL 343
             ++ S     I  Q S+   VA A T++++S  +V+  A  A      AD E      +
Sbjct: 412 TSAITSQTTIGIQEQKSQVDQVATATTELSSSAHQVNMSADDALSQIKQADEETQHMRTI 471

Query: 344 VGEVTVSIEELATILDHATLRVNQVSSDSENIETVIEVINAIAAQTNLLALNAAIEAARA 403
             E   +I  LA  +  A+  +N+V SDS +I ++++VI  IA QTNLLALNAAIEAARA
Sbjct: 472 ADENKRTILSLADEVAKASKVINKVHSDSASIGSILDVIRGIAEQTNLLALNAAIEAARA 531

Query: 404 GEHGRGFAVVADEVRSLATRTQESTQEIRDMIGKLQSGTQDAADIMQRSRSLAQTTVTQT 463
           GE GRGFAVVADEVRSLA+RTQ+ST+EI+ MI  LQ GTQ A  +MQ  ++ AQ+ V +T
Sbjct: 532 GEQGRGFAVVADEVRSLASRTQDSTREIQQMIEVLQQGTQQAVAVMQLGQNQAQSCVEKT 591

Query: 464 RDSQLALGKISQEVGAINAMNAQIASVSVQQSAAAEEVAQNVTRIHSSTVQSAAGSEQVE 523
             +  AL  IS  V         IA  + +Q+  +++V++ +  I + + ++A G+EQ  
Sbjct: 592 EQANQALQTISHSVHKAYDAGTHIAQAAQEQNLVSQQVSEKLEHIAAISEETALGAEQTA 651

Query: 524 NSNHELAELADRLSTKVAFFNV 545
            S+HE+A LA+ L + V  F V
Sbjct: 652 KSSHEVARLAEELQSSVKEFRV 673